TCONS_00050328-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050328-protein
Unique NameTCONS_00050328-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length302

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050328-protein ID=TCONS_00050328-protein|Name=TCONS_00050328-protein|organism=Clytia hemisphaerica|type=polypeptide|length=302bp
MAGYDHSKGIGIKEITVVEVRNPIVQHEGSLKQFTDYEVCIKTTSKAFII
PQSSVRRRYSDFVWLKKWLEKQNDAFSRVRTPKMPPKKLMGKTDPDFIQA
RMRGLQKFLRKIIEHNVFLSDKALHLFLQSTMKVKQIECYLVGNSTKEFV
DNSDALVSHFEAEKKQTTQSVLHSISESLPIEQNDDNQSESSRSRAASSY
GKSPSYSASSISTNSLLDSFEAISVSDCEANDREELTSVAVIEHLKIKQL
VRESENKEESDADSLKGMQEDEKNFDLLDDEPVKDKNNGSQNSLAECDRQ
DK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031862XLOC_031862Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050328TCONS_00050328Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683Phox
Vocabulary: Molecular Function
TermDefinition
GO:0035091phosphatidylinositol binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0035091 phosphatidylinositol binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001683Phox homologous domainSMARTSM00312PX_2coord: 10..131
e-value: 1.8E-11
score: 54.1
IPR001683Phox homologous domainPFAMPF00787PXcoord: 16..130
e-value: 2.6E-21
score: 75.6
IPR001683Phox homologous domainGENE3D3.30.1520.10coord: 12..136
e-value: 1.6E-24
score: 85.9
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 15..134
score: 16.194
IPR001683Phox homologous domainSUPERFAMILY64268PX domaincoord: 17..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..302

Blast
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BLAST of TCONS_00050328-protein vs. Swiss-Prot (Human)
Match: SNX11 (Sorting nexin-11 OS=Homo sapiens GN=SNX11 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.261e-30
Identity = 62/147 (42.18%), Postives = 90/147 (61.22%), Query Frame = 0 
Query:   13 KEITVVEVRNPIVQHEGSLKQFTDYEVCIKTTSKAFIIPQSSVRRRYSDFVWLKKWLEKQNDAFSRVRTPKMPPKKLMGKTDPDFIQARMRGLQKFLRKIIEHNVFLSDKALHLFLQSTMKVKQIECYLVGNSTKEFVDNSDALVSH 159
            +E+  V V++P VQ+EGS   + DY++ + T SKAF    S VRRRY +FVWL+K L++       V  P++P K     T  +FI+ R +GLQ FL K+++  V LSD  LHLFLQS + V +IE  + G ST   +  SDA++ +
Sbjct:   14 EEVITVRVQDPRVQNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGL---VPVPELPGKSTFFGTSDEFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQSQLSVPEIEACVQGRST---MTVSDAILRY 154
The following BLAST results are available for this feature:
BLAST of TCONS_00050328-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNX111.261e-3042.18Sorting nexin-11 OS=Homo sapiens GN=SNX11 PE=1 SV=... [more]
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