TCONS_00050348-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050348-protein
Unique NameTCONS_00050348-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length319

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050348-protein ID=TCONS_00050348-protein|Name=TCONS_00050348-protein|organism=Clytia hemisphaerica|type=polypeptide|length=319bp
MDVKDIFCDQDELLCYEGLGYDNDLYSSPAYSDDSGFSGQNFSLETLLDD
VLPPVINDVEFTNIKDFSRSDSVSSNIHDHPYSLPDQTIEPVVIVSDTDE
INVDELPDNAVVNNEPVSRQSIAKPVVTRKRNLSDCEPAEILSKSSKIDS
KSDHNIDVLKCDDETFSYKDENGKVIVVDRSRKNAEMARLNRQRKKKHLS
NLETEVKTLRSQNNKLSLKTTKQEKKIKTLEDEVAYLMSVIRNQTMLSSV
LKAVSTVPGVSIGAKTPPGPKLYERLLPGKRMPTHDDDEDAVDYNGGVCL
HVSNNKVSLEFCSTCNKNQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031876XLOC_031876Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050348TCONS_00050348Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 185..233
NoneNo IPR availableGENE3D1.20.5.170coord: 161..246
e-value: 2.2E-10
score: 39.8
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 180..226
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 180..237
score: 8.668

Blast
[Close]
BLAST of TCONS_00050348-protein vs. Swiss-Prot (Human)
Match: ZHANG (CREB/ATF bZIP transcription factor OS=Homo sapiens GN=CREBZF PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.282e-16
Identity = 46/135 (34.07%), Postives = 76/135 (56.30%), Query Frame = 0 
Query:  189 RLNRQRKKKHLSNLETEVKTLRSQNNKLSLKTTKQEKKIKTLEDEVAYLMSVIRNQTMLSSVLKAVSTVP---GVSIGAKTPPGPKLYERLLPGKRMPTHDDDEDAV---DYNGGVCLHVSNNKVSLEFCSTCNK 317
            RLNR +KK+++  LE+ V+ L ++N +L  +  +  K+++ L++E  YL +V+ N+T L+ +L  +S V      S+   +P G   Y        +P     +D +   D  GGVCLHV  +KVS+EFCS C +
Sbjct:  219 RLNRLKKKEYVMGLESRVRGLAAENQELRAENRELGKRVQALQEESRYLRAVLANETGLARLLSRLSGVGLRLTTSLFRDSPAGDHDYA-------LPVGKQKQDLLEEDDSAGGVCLHVDKDKVSVEFCSACAR 346
The following BLAST results are available for this feature:
BLAST of TCONS_00050348-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZHANG1.282e-1634.07CREB/ATF bZIP transcription factor OS=Homo sapiens... [more]
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