TCONS_00050416-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050416-protein
Unique NameTCONS_00050416-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length405

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050416-protein ID=TCONS_00050416-protein|Name=TCONS_00050416-protein|organism=Clytia hemisphaerica|type=polypeptide|length=405bp
MLLLFFILTREFKLKNQMILNIMSTDANDSTEGSSFVTMQDAVSAMESEE
EHSIAVFGAGDEKNCTYIMGYLSRQAVFSCQTCDPTFEREAGLCYACSLD
CHHEHDLVELYTKRNFKCDCGNSKYGEFKCKLQETKSAINEENKYNHNFK
GEYCTCNRPYPDPEDEVDDEMIQCIVCEDWFHSRHLGSLPPMCYEEMVCD
GCVQKYPFFNRYKQLTEGPATRLTNEETTTSIDVTTCPSPSKKRRKMSDN
NNVEDDGEPSTSSQDSCKISIPLDEEAGTKALYFKSKWRSELCRCSKCMA
MYEEKGLGFLTSDEDTIAVYEKKGKENSSRVMESAADQISQMNRVQQVEL
MRGYQDLKEKLHGFLEGFSKTDQVVKKEDIENFFEDLNKKRRERSNNGLP
PGSCK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031924XLOC_031924Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050416TCONS_00050416Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003126Znf_UBR
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 405..405
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..268
NoneNo IPR availableCDDcd15542PHD_UBR7coord: 153..202
e-value: 1.76008E-25
score: 96.6678
IPR003126Zinc finger, UBR-typeSMARTSM00396push_1coord: 63..134
e-value: 2.8E-17
score: 73.4
IPR003126Zinc finger, UBR-typePFAMPF02207zf-UBRcoord: 65..132
e-value: 3.1E-12
score: 46.4
IPR003126Zinc finger, UBR-typePROSITEPS51157ZF_UBRcoord: 63..135
score: 8.618
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 136..207
e-value: 3.3E-8
score: 32.7
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 140..212

Blast
[Close]
BLAST of TCONS_00050416-protein vs. Swiss-Prot (Human)
Match: UBR7 (Putative E3 ubiquitin-protein ligase UBR7 OS=Homo sapiens GN=UBR7 PE=1 SV=2)

HSP 1 Score: 285.419 bits (729), Expect = 7.211e-93
Identity = 155/385 (40.26%), Postives = 210/385 (54.55%), Query Frame = 0 
Query:   53 SIAVFGAGDEKNCTYIMGYLSRQAVFSCQTCDPTFEREAGLCYACSLDCHHEHDLVELYTKRNFKCDCGNSKYGEFKCKLQETKSAINEENKYNHNFKGEYCTCNRPYPDPEDEVDDEMIQCIVCEDWFHSRHLGSLPPMC--YEEMVCDGCVQKYPFFNRYKQLTEGPATRLTNE-------------------ETTTSIDVTTCPSPSKKRRKMSDNNNVEDDGEPSTSSQDSCKI-------SIPLDEEAGTK--------------ALYFKSKWRSELCRCSKCMAMYEEKGLGFLTSDEDTIAVYEKKGK-ENSSRVMESAADQISQMNRVQQVELMRGYQDLKEKLHGFLEGFSKTDQVVKKEDIENFFEDLNKKRRER 394
            + AV G  D + C+Y  G + RQA+++C TC P  E  AG+C ACS +CH  H L ELYTKRNF+CDCGNSK+   +CKL   K+ +N  NKYN NF G YC C RPYPDPEDE+ DEMIQC+VCEDWFH RHLG++PP    ++EMVC  C+++  F   Y    +   T+++ E                   E     D T      ++ +       VE + EP   S     +       S+  + ++G K              A Y+   WRS+LC C  CM MY +  + FLT + DT+  YE KGK   ++   +   D +S MNRVQQVEL+  Y DLK +L  +L+ F+    VVK+EDI+ FFE+   K+R R
Sbjct:   34 ACAVLGGSDSEKCSYSQGSVKRQALYACSTCTPEGEEPAGICLACSYECHGSHKLFELYTKRNFRCDCGNSKFKNLECKLLPDKAKVNSGNKYNDNFFGLYCICKRPYPDPEDEIPDEMIQCVVCEDWFHGRHLGAIPPESGDFQEMVCQACMKRCSFLWAYA--AQLAVTKISTEDDGLVRNIDGIGDQEVIKPENGEHQDSTLKEDVPEQGKDDVREVKVEQNSEPCAGSSSESDLQTVFKNESLNAESKSGCKLQELKAKQLIKKDTATYWPLNWRSKLCTCQDCMKMYGDLDVLFLTDEYDTVLAYENKGKIAQATDRSDPLMDTLSSMNRVQQVELICEYNDLKTELKDYLKRFADEGTVVKREDIQQFFEEFQSKKRRR 416
The following BLAST results are available for this feature:
BLAST of TCONS_00050416-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBR77.211e-9340.26Putative E3 ubiquitin-protein ligase UBR7 OS=Homo ... [more]
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