TCONS_00050418-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050418-protein
Unique NameTCONS_00050418-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length187

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050418-protein ID=TCONS_00050418-protein|Name=TCONS_00050418-protein|organism=Clytia hemisphaerica|type=polypeptide|length=187bp
MHLGNQVMPLLSMAMEYGMEQLIKICEKFISSSINIENACCSMQAAVTFG
LDNFKRTLLPFIEQNTAEIFKTKSFNELSETTLSYILQSDELTMDEYDLM
KAIKGWAVVNSVALGRPLSEISRTVVCNLRLSLLSAEELARLETENMKEH
FIPVEQISMAWKHLALKTPLHSTLDTTPRKGTIPRKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031925XLOC_031925Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050418TCONS_00050418Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011705BACK
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011705BTB/Kelch-associatedSMARTSM00875BACK_2coord: 40..143
e-value: 1.3E-4
score: 31.3
IPR011705BTB/Kelch-associatedPFAMPF07707BACKcoord: 43..141
e-value: 8.7E-10
score: 38.5
NoneNo IPR availableGENE3D3.30.710.10coord: 3..74
e-value: 1.0E-10
score: 41.1

Blast
[Close]
BLAST of TCONS_00050418-protein vs. Swiss-Prot (Human)
Match: BTBDJ (BTB/POZ domain-containing protein 19 OS=Homo sapiens GN=BTBD19 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 9.793e-37
Identity = 72/183 (39.34%), Postives = 118/183 (64.48%), Query Frame = 0 
Query:    5 NQVMPLLSMAMEYGMEQLIKICEKFISSSINIENACCSMQAAVTFGLDNFKRTLLPFIEQNTAEIFKTKSFNELSETTLSYILQSDELTMDEYDLMKAIKGWAVVNSVALGRPLSEISRTVVCNLRLSLLSAEELARLETENMKEHFIPVEQISMAWKHLALKTPLHS-TLDTTPRKGTIPRK 186
            + V+ +L+ A+EYG+E+L ++C +F+   ++++  C ++Q AVTFGL   +   + FIE ++ E  +T+ F ELS   L  +L+SD+L +DE +L++A + WA V +  L RP++E++  VV  LRL+LL+  EL+ LE +N +E  IPVEQI  AWK  AL+    +       R+GT+PR+
Sbjct:   99 HSVLEVLTAAVEYGLEELRELCLQFVVKVLDVDLVCEALQVAVTFGLGQLQERCVAFIEAHSQEALRTRGFLELSAAALLPLLRSDKLCVDEAELVRAARSWARVGAAVLERPVAEVAAPVVKELRLALLAPAELSALEEQNRQEPLIPVEQIVEAWKCHALRRGDEARGAPCRRRRGTLPRE 281
The following BLAST results are available for this feature:
BLAST of TCONS_00050418-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BTBDJ9.793e-3739.34BTB/POZ domain-containing protein 19 OS=Homo sapie... [more]
back to top