TCONS_00050434-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050434-protein
Unique NameTCONS_00050434-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length284

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050434-protein ID=TCONS_00050434-protein|Name=TCONS_00050434-protein|organism=Clytia hemisphaerica|type=polypeptide|length=284bp
MGKEDKAVLSHSEGEESDSENEFLEENERILGEDEPTEKRELINNQELMK
VRLEELKKEIDWIERMDVTVDLSDLPGLNPTDETEDESKKTNGTKEEVVD
DFQRELQFYRQAQVSAKEALSKLRDMGVPTERPEDYFAEMVKSDAHMQKI
RQKMLSKKESIEKSEKAKKQRTLKKYGKQIQHQVLQKRQQDKKKMLQAVD
HLKKNKGKLEKLSGKDDMFDINTGDRNQNKQSGGLKRKRKDDKFGFGGQK
KKFKKNSAQSSANAMSDFKRNVHGKKXKLRQRHV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031936XLOC_031936Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050434TCONS_00050434Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008610Ebp2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 185..212
NoneNo IPR availableCOILSCoilCoilcoord: 39..59
IPR008610Eukaryotic rRNA processingPFAMPF05890Ebp2coord: 17..278
e-value: 1.0E-70
score: 238.2

Blast
[Close]
BLAST of TCONS_00050434-protein vs. Swiss-Prot (Human)
Match: EBP2 (Probable rRNA-processing protein EBP2 OS=Homo sapiens GN=EBNA1BP2 PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 2.008e-43
Identity = 83/195 (42.56%), Postives = 121/195 (62.05%), Query Frame = 0 
Query:   43 INNQELMKVRLEELKKEIDWIERMDVTVDLSDLPGLNPTDETEDESKKTNGTKEEVVDDFQRELQFYRQAQVSAKEALSKLRDMGVPTERPEDYFAEMVKSDAHMQKIRQKMLSKKESIEKSEKAKKQRTLKKYGKQIQHQVLQKRQQDKKKMLQAVDHLKKNKGKLEKLSGKDDMFDINTGDRN---QNKQSGG 234
            +N+   +K  L E K++++W+ER+DVT  L  +P +  ++    ++K       E  DDFQRE+ FYRQAQ +    L +L  + VPT+RP DYFAEM KSD  MQKIRQK+ +K+ ++E+SEKAK+ R L+KYGK++Q +VLQKRQQ+K  M+ A+   +K         G  D  D   GD+    Q K++G 
Sbjct:   47 VNDVNGLKQCLAEFKRDLEWVERLDVT--LGPVPEIGGSEAPAPQNKDQKAVDPE--DDFQREMSFYRQAQAAVLAVLPRLHQLKVPTKRPTDYFAEMAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKYQK---------GFSDKLDFLEGDQKPLAQRKKAGA 228
The following BLAST results are available for this feature:
BLAST of TCONS_00050434-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EBP22.008e-4342.56Probable rRNA-processing protein EBP2 OS=Homo sapi... [more]
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