TCONS_00050465-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050465-protein
Unique NameTCONS_00050465-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length193

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050465-protein ID=TCONS_00050465-protein|Name=TCONS_00050465-protein|organism=Clytia hemisphaerica|type=polypeptide|length=193bp
MSNKDNGNVRDLFGGALSCFFPTNALDMSEIREVPNNQEVFHHQKTDQSI
MFDILEYQDQVHGSEAIKYHYMDIAEVNDASEEAEVNTVEEIPKENLSIK
ECSQALFLLGRQMISKYKEGADAKNLVNILMVLYRLPQYETDLLIIMNDP
VAISTKSSSSGNNTTPNDASKWSEKLFKQIACSLKIVDSSLFG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031958XLOC_031958Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050465TCONS_00050465Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007681Mog1
IPR016123Mog1/PsbP_a/b/a-sand
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1000.10coord: 6..193
e-value: 5.8E-56
score: 188.8
IPR007681Ran-interacting Mog1 proteinPFAMPF04603Mog1coord: 11..150
e-value: 1.4E-40
score: 138.8
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 10..193

Blast
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BLAST of TCONS_00050465-protein vs. Swiss-Prot (Human)
Match: MOG1 (Ran guanine nucleotide release factor OS=Homo sapiens GN=RANGRF PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.974e-39
Identity = 73/183 (39.89%), Postives = 105/183 (57.38%), Query Frame = 0 
Query:   12 LFGGALSCFFPTNALDMSEIREVPNNQEVFHHQKTDQSIMFDILEYQDQVHGSEAIKYHYMDIAEVNDASEEAEVNTVEEIPKENLSIK-ECSQALFLLGRQMISKYKEGADAKNLVNILMVLYRLPQYETDLLIIMNDPVAISTKSSSSGNNTTPNDASKWSEKLFKQIACSLKIVDSSLFG 193
            LFGGA S   P  A+D+S++R VP+NQEVF H  TDQS++ ++LE Q  V G  A +YH+ D+  V  A     V +V+ +  ENL+++  C +A  L G+Q I+  KE       V +   L RLPQY+TDLL+  N P     +SS    N +P   + WS   F+Q+  SL + D ++FG
Sbjct:    9 LFGGAFSAILPMGAIDVSDLRPVPDNQEVFCHPVTDQSLIVELLELQAHVRGEAAARYHFEDVGGVQGA-RAVHVESVQPLSLENLALRGRCQEAWVLSGKQQIA--KENQQVAKDVTLHQALLRLPQYQTDLLLTFNQPPP-DNRSSLGPENLSP---APWSLGDFEQLVTSLTLHDPNIFG 184
The following BLAST results are available for this feature:
BLAST of TCONS_00050465-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MOG15.974e-3939.89Ran guanine nucleotide release factor OS=Homo sapi... [more]
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