TCONS_00050503-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050503-protein
Unique NameTCONS_00050503-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length676

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050503-protein ID=TCONS_00050503-protein|Name=TCONS_00050503-protein|organism=Clytia hemisphaerica|type=polypeptide|length=676bp
MGLFSTTKTKKYTVTVKTGKAEKSGTNATIKIVLVDESGKSSEKFSLNRL
FYNDFEYGREDDYGVHTEEDFGNLHAIILHRDKIGLYDDWFVEHVAVHHE
LEGKIHFPLNRWMPANKPMHFEKYDSQLPQIVKANNPGLYKQREDELKVK
QKNFHYAPIGGMKGMPRSVTTLPPEEVFSKDYTKEVGLTKLGSQVSGFLN
SLRYPSEFNSFADFYQLFFGRINVFDVPSGHQNWRSDEKFAALRLIGPNC
TKIRGCKKDGGIPKKFKVEEEKISLFLEGKSLAEQIEADKLFYVTYQDLE
EYVMPANNEPMVCPFALFYSRCDGVLVPIAIQLFQEPSEDNPVFYPPPID
EETLWLLAKFWFGVADSNYHEPVTHLMETHMVAGDFITCFHHSISPSHPI
YKLLLPHFIFLLHINTKGLPVLTGATGTFNKVLMLGKENCDALMLKKYQQ
YSLKEDGWLDAEIENRGVGNLANYHYYEDGKLIFDAIHDYMKDCINTIYD
GEDDNLAQDFEMQNFAKMLSDPEEGMKGVWGDGKFEKLDDLIKTVTSIVY
ILSCAHSAANFNQYDEYGFQPNFPFKLNGSPPKNKDSVTELELVKLFDVD
ITIETLKLGRVLSTQGTNKIGNYEVQYEYKPAIHAHYQKFYERLQVIAKE
NDEKNAKRRFAYPWLSPKVVPNSISI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031982XLOC_031982Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050503TCONS_00050503Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013819LipOase_C
IPR001024PLAT/LH2_dom
IPR020834LipOase_CS
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013819Lipoxygenase, C-terminalPRINTSPR00087LIPOXYGENASEcoord: 352..369
score: 41.67
coord: 390..410
score: 43.61
coord: 370..387
score: 36.19
IPR013819Lipoxygenase, C-terminalPFAMPF00305Lipoxygenasecoord: 231..659
e-value: 3.7E-47
score: 161.0
IPR013819Lipoxygenase, C-terminalPROSITEPS51393LIPOXYGENASE_3coord: 129..676
score: 75.684
IPR013819Lipoxygenase, C-terminalSUPERFAMILY48484Lipoxigenasecoord: 136..676
IPR001024PLAT/LH2 domainSMARTSM00308LH2_4coord: 10..123
e-value: 1.7E-5
score: 31.4
IPR001024PLAT/LH2 domainGENE3D2.60.60.20coord: 5..123
e-value: 4.0E-22
score: 77.9
IPR001024PLAT/LH2 domainPFAMPF01477PLATcoord: 12..113
e-value: 7.3E-20
score: 71.6
IPR001024PLAT/LH2 domainPROSITEPS50095PLATcoord: 10..127
score: 29.689
IPR001024PLAT/LH2 domainSUPERFAMILY49723Lipase/lipooxygenase domain (PLAT/LH2 domain)coord: 7..118
NoneNo IPR availableGENE3D1.20.245.10coord: 188..266
e-value: 6.8E-4
score: 17.9
NoneNo IPR availableGENE3D3.10.450.60coord: 267..366
e-value: 1.2E-22
score: 79.7
NoneNo IPR availableGENE3D1.20.245.10coord: 367..676
e-value: 9.6E-73
score: 244.7
IPR020834Lipoxygenase, conserved sitePROSITEPS00081LIPOXYGENASE_2coord: 397..407

Blast
[Close]
BLAST of TCONS_00050503-protein vs. Swiss-Prot (Human)
Match: LOX5 (Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALOX5 PE=1 SV=2)

HSP 1 Score: 258.07 bits (658), Expect = 1.809e-76
Identity = 198/688 (28.78%), Postives = 329/688 (47.82%), Query Frame = 0 
Query:   12 YTVTVKTGKAEKSGTNATIKIVLVDESGKSSEKFSLNRLFYNDFEYGREDDYGVHTEEDFGNLHAIILHRDKIGLYDDWFVEHVAVHHELEGKIHFPLNRWMPANKPMHFEKYDSQLPQIVKANNPGLYKQ-REDELKVKQKNFHYAPIGGMKGMPRSVTT-----LPPEEVFSKDYTKEVGLTKLGSQVSGFLNSLR--YPSEFNSFADFYQLFFGRINVFDVPSGHQNWRSDEKFAALRLIGPNCTKIRGCKKDGGIPKKFKVEEEKISLFLEGK-SLAEQIEADKLFYVTYQDLE----EYVMPANNEPMVCPFALFYSRCDGVLVPIAIQLFQEPSEDNPVFYPPPIDEETLWLLAKFWFGVADSNYHEPVTHLMETHMVAGDFITCFHHSISPSHPIYKLLLPHFIFLLHINTKGLPVLTGATGTFNKVLMLGKENCDALMLKKYQQYSLKEDGWLDAEIENRGV---GNLANYHYYEDGKLIFDAIHDYMKDCINTIYDGEDDNLAQDFEMQNFAKMLSDPEEGMKGVWGDG---KFEKLDDLIKTVTSIVYILSCAHSAANFNQYDEYGFQPNFPFKLNGSPPKNKDSVTELELVKLFDVDITIETLKLGRV--LSTQGTNK--IGNYEVQYEYKPAIHAHYQKFYERLQVIAKENDEKNAKRRFAYPWLSPKVVPNSISI 676
            YTVTV TG    +GT+  I + LV  +G  SEK  L++ FYNDFE G  D Y V  +E+ G +  + + + K  L DDW+++++ +       I FP  RW+  +  +      ++L    + +   + KQ R  EL+ +QK + +  +    G P S+       LP +  F  +   +  L    +  + F+N     + S +N FADF ++F    N         +W+ D  F    L G N   IR C +   +P+K  V  E +   LE + SL ++++   +F V ++ L+        P   + +  P  L Y      +VPIAIQL Q P ++NP+F P   D +  WLLAK W   +D + H+ +THL+ TH+V+  F    +  +   HPI+KLL+ H  F + INTK    L    G F+K    G      ++ +  +  +     + +A I+ RG+    ++  Y Y +DG L+++AI  +  + ++  Y+G D  + +D E+Q+F   +     GM+G    G     +  + L + +T +++  S  H+A NF QYD   + PN P  +   PP  K  VT  ++V     D       LG V  LS    N+  +G Y  ++  +  +     +F + L+ I     E+N K++  Y +LSP  +PNS++I
Sbjct:    4 YTVTVATGSQWFAGTDDYIYLSLVGSAG-CSEKHLLDKPFYNDFERGAVDSYDVTVDEELGEIQLVRIEKRKYWLNDDWYLKYITLKTPHGDYIEFPCYRWITGDVEVVLRDGRAKL---ARDDQIHILKQHRRKELETRQKQYRW--MEWNPGFPLSIDAKCHKDLPRDIQFDSEKGVDFVLNYSKAMENLFINRFMHMFQSSWNDFADFEKIFVKISNTIS-ERVMNHWQEDLMFGYQFLNGCNPVLIRRCTE---LPEKLPVTTEMVECSLERQLSLEQEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGDENPIFLPS--DAKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYASLCFPEA-IKARGMESKEDIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEG-DQVVEEDPELQDFVNDVY--VYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRAPPPTAKGVVTIEQIVDTLP-DRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKPVKEAMARFRKNLEAIVSVIAERNKKKQLPYYYLSPDRIPNSVAI 674
The following BLAST results are available for this feature:
BLAST of TCONS_00050503-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LOX51.809e-7628.78Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALO... [more]
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