TCONS_00050530-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050530-protein
Unique NameTCONS_00050530-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length373

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050530-protein ID=TCONS_00050530-protein|Name=TCONS_00050530-protein|organism=Clytia hemisphaerica|type=polypeptide|length=373bp
MHVFFDARQKDSMPGMNFAFHCETPLSQEYPFLLRCPKIEAGIKECQARG
KQVLLSLGGATGGYGFKNDAEAKLFAQRVWDLVLGGDKLKKLRPFGSAVL
DGVDLDIEGGSHIGYTQFTRTLRRCMDADHSKKYIIAAAPQCPFPDHYLG
PAPGKAFTDAATCFDEIYIQFYNNYCHTGDAKQFYPNLRQWLDYSAKTNG
PKIYVGVPSHEAAAFGRGYWRTPAEMAAIYNKIRNEPRFGGFMLWDASFD
QNNVIGGLRYSQHLDRILGGNGGGGGHWTTKRPRPTKTVRPRPDTTRPDT
TRPPKPVTTKRPAPTKPSKVSCAGMPDGIYAHPKDCSKYFECYIEQLFLK
QCPPGLKFNAARKYCDWPANVTC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032000XLOC_032000Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050530TCONS_00050530Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
IPR001223Glyco_hydro18_cat
IPR001579Glyco_hydro_18_chit_AS
IPR017853Glycoside_hydrolase_SF
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002557Chitin binding domainSMARTSM00494chi_10coord: 320..372
e-value: 1.3E-9
score: 47.9
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 322..373
e-value: 2.4E-15
score: 56.3
IPR002557Chitin binding domainGENE3D2.170.140.10coord: 312..373
e-value: 2.1E-17
score: 62.3
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 319..373
score: 14.154
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 314..373
NoneNo IPR availableGENE3D3.20.20.80coord: 2..272
e-value: 2.0E-45
score: 155.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 271..320
IPR001223Glycoside hydrolase family 18, catalytic domainPFAMPF00704Glyco_hydro_18coord: 43..212
e-value: 4.9E-19
score: 69.1
IPR001579Glycoside hydrolase, chitinase active sitePROSITEPS01095CHITINASE_18coord: 100..108
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 11..259

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050530-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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