TCONS_00050547-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050547-protein
Unique NameTCONS_00050547-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length859

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050547-protein ID=TCONS_00050547-protein|Name=TCONS_00050547-protein|organism=Clytia hemisphaerica|type=polypeptide|length=859bp
LIFLLVLIAEKITVNGLPESITGGLKDKRSVFVREEIQDDEEQIKCFPGI
KRFSSLDERKYYSCEEGNGYAVLKTCPGNQVYWPQKEICYQPDEDETQGD
QDVRVRRASSPQAKNKGRKATIIKRKLLRSDVSLGEFYDAKNDQFLSGVS
LWSMEELEKHRKRRFARPSTNYQFDSGKTEDSRMNLMDIDASLKLSFMGG
LIEVSGSAQYVRQSDVLTTDETFTLAYKSTSFYNVLPVTAVKNFPKQCDN
KQATHVVSKVVYGQNAFYFFKRSVSRKENKEKIAGSLQVLVKSIPSFSIE
GSATVKVDGEEKSFRESVQVRFNGDFKLPGGFPATFEEAVKSFKKLQDYT
AQPPDYVNAVPVEVQLTPIQDFCDATDTILVSIGDSLTQQTAEMLSHFNV
LIMEIKTLLNSGPAFAYPVIRENLNLYKIKLNSKFLKIKEKLQTLLPDIR
AGKEGAKELNNLLVENNESPFEFVKSEAFLNSRSLEIRALNLLTDGFNEY
SLKNFRVADFKQPTRAQIMMNYHHVVVLDVNILQSKQITQKFLQNEKINS
SFWYKNDAKASELGKQKKLFKKFLEANQNSNKFGYLISINLRDEDQPIRV
QAKRSGVADSLDFIIPDVRQIGKPKVTFVSYDHFKISVTKPSNAWVTHFL
VEYWPIIDDSEESKTSLKFAFSLQNTQNVTITNLNYLTTYEVRIVHVTEF
GISPTGEKVSVTTKPSSEPTILKFQSSESSLKISWSEPVYQANGIKIEDY
RVVLKDSVGQVVADQQVQDVTNIKFDNLNAVTKYIVTVKAIAEFIRKDSA
TNTTKKIQEYSHPATLIAFTAANPLNPNSFQANADYYSVTLDLGKSNITQ
VPRVTGYVV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032012XLOC_032012Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050547TCONS_00050547Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR013783Ig-like_fold
IPR002557Chitin-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008061chitin binding
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 618..703
e-value: 0.12
score: 21.5
coord: 716..799
e-value: 0.031
score: 23.4
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 717..791
e-value: 1.3E-7
score: 31.7
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 620..716
score: 16.063
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 718..814
score: 9.073
IPR003961Fibronectin type IIICDDcd00063FN3coord: 717..791
e-value: 1.30703E-5
score: 43.2539
IPR003961Fibronectin type IIICDDcd00063FN3coord: 622..713
e-value: 2.45015E-8
score: 51.3431
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 623..791
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 598..716
e-value: 5.0E-9
score: 35.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 717..816
e-value: 4.0E-9
score: 36.1
IPR002557Chitin binding domainGENE3D2.170.140.10coord: 38..107
e-value: 3.5E-5
score: 23.1
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 50..94

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050547-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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