TCONS_00050620-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050620-protein
Unique NameTCONS_00050620-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length895

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050620-protein ID=TCONS_00050620-protein|Name=TCONS_00050620-protein|organism=Clytia hemisphaerica|type=polypeptide|length=895bp
VIAFYRDNNIDTAFDLNNLRIDFHGQWKGSVVMNFTIIYPENPFVEVFMM
QSELESGSLKNLSLVPQNITSKKLPLAPVNISLSSPQPFIINLSWKENPS
NNYTEPKNDPFYLYYVFYAEIHDEANYKINKWINFGSKNTSVQLRDLESG
SLYAVRILASTIKTMGLSTETQVIQVYEGPPKSKPQNTTHQFMDPRQIFI
SWDHIPKSEVPGKLRGYRIMYRIYQTNENVTLEVSGNINQKFIPGLKPYT
WYWFEIWGFTRGGPGPVHVFMDQTPMAPPGSEPMNVTIHEKYSIDQLFIT
WKPVLKHLQNGPLDGYKIVYYPNRIGGEIVGKLDDPMELTFDKYTFSWNI
TDLQSYTEYTVEIFAYNKVGTGPKVTLLARTCNCPRHILTNFIAAAPYVV
KNTSTIYPTYTGVFPFILQRIVDTICSDCINGGSSLLSYNVSLDGLSNEK
ESILDMKNGVSENVQVTFPMFGKFEMTRHAGQYPYIGMVNSQGIAVLKYQ
PRIVAIGLWRLLTAVMGAWPVIMVAVLMCTIVGILFWFTEFDSELEEVSK
DSMIRGAMGGLWVAFITMTSVGYGDITPSTNKSKALMVIWVLAGFILLGI
ISSAIASGMSVGQMKDGFKLYGAKIGVIEGSYEYNVAVRRNGKVNESTTY
AELDELIEAVGAEEVEIGLVDSTELLGKEKYLEEKSIMITRILNYNTGYG
FVLSGDLIRLESDFRAYITGNQAYLIWYIEKVLGRLNPTMIETLEVLLMP
EEASTILLQLCGIWAVAVLLGASFSFIRDTFCQGKSKVQPRGTPEQRYAD
VNTSLTKEVSSFHQKFTGSVEEISNRQDDEKIELDRLQRCYKSWKYRDNF
HNIFKLEADLELHRTKKKERAAELKTKKATMYQRELDFKKRLHYN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032063XLOC_032063Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050620TCONS_00050620Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR013783Ig-like_fold
IPR013099K_chnl_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 280..372
e-value: 3.3E-4
score: 30.0
coord: 182..265
e-value: 0.012
score: 24.8
coord: 75..166
e-value: 0.0057
score: 25.9
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 183..266
e-value: 1.6E-6
score: 28.3
coord: 281..373
e-value: 2.1E-10
score: 40.7
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 77..179
score: 13.002
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 184..280
score: 14.257
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 282..385
score: 15.345
IPR003961Fibronectin type IIICDDcd00063FN3coord: 183..266
e-value: 1.15266E-6
score: 46.3355
IPR003961Fibronectin type IIICDDcd00063FN3coord: 75..176
e-value: 3.12391E-5
score: 42.0983
IPR003961Fibronectin type IIICDDcd00063FN3coord: 281..373
e-value: 4.57638E-8
score: 50.5727
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 270..376
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 74..268
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 279..388
e-value: 1.2E-13
score: 50.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 184..278
e-value: 6.0E-11
score: 42.0
coord: 68..183
e-value: 4.8E-10
score: 39.1
NoneNo IPR availableGENE3D1.10.287.70coord: 512..830
e-value: 5.1E-20
score: 71.0
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 507..610
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 554..607
e-value: 2.8E-8
score: 33.5

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050620-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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