TCONS_00050698-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050698-protein
Unique NameTCONS_00050698-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length290

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050698-protein ID=TCONS_00050698-protein|Name=TCONS_00050698-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
NGQSKSVILVLDEFDLFAYHKNQSLLYNLFDIAQSKQNPLCVIGLTCRLD
VVELLEKRVKSRYSHRAILTFPSYSFEEYVDIVSSFLKLSEDFPCKKFKD
RWNRNLDENLSESSVCCEILLKQYNLQKDFQSLIRLLTPVVYGISNKKPF
ISNTDFVEAYTSLHIDSKTALLNGLSTLELSLLVAAKHVFNRREGQPFNY
EMVYNEYENFLKRRLSGMQNFNKAVAYKAYEHLISLELLKSTETLSINST
SKEFKAMTLLLEPSQIKEIVYRYPECPTELRQWADSMFVY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032122XLOC_032122Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050698TCONS_00050698Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032705ORC4_C
IPR016527ORC4
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: Cellular Component
TermDefinition
GO:0000808origin recognition complex
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006260 DNA replication
cellular_component GO:0005634 nucleus
cellular_component GO:0000808 origin recognition complex
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032705Origin recognition complex subunit 4, C-terminalPFAMPF14629ORC4_Ccoord: 81..270
e-value: 3.6E-42
score: 144.1
NoneNo IPR availableGENE3D3.40.50.300coord: 2..72
e-value: 4.9E-5
score: 22.3
IPR016527Origin recognition complex subunit 4PIRSFPIRSF007858ORC4coord: 1..290
e-value: 2.7E-93
score: 310.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..89

Blast
[Close]
BLAST of TCONS_00050698-protein vs. Swiss-Prot (Human)
Match: ORC4 (Origin recognition complex subunit 4 OS=Homo sapiens GN=ORC4 PE=1 SV=2)

HSP 1 Score: 275.789 bits (704), Expect = 1.314e-90
Identity = 137/280 (48.93%), Postives = 192/280 (68.57%), Query Frame = 0 
Query:    7 VILVLDEFDLFAYHKNQSLLYNLFDIAQSKQNPLCVIGLTCRLDVVELLEKRVKSRYSHRAILTFPSYSFEEYVDIVSSFLKLSEDFPCKKFKDRWNRNLDENLSESSVCCEILLKQYNLQKDFQSLIRLLTPVVYGISNKKPFISNTDFVEAYTSLHIDSKTALLNGLSTLELSLLVAAKHVFNRREGQPFNYEMVYNEYENFLKRRLSGMQNFNKAVAYKAYEHLISLELLKSTETLSINSTSKEFKAMTLLLEPSQIKEIVYRYPECPTELRQWADS 286
            VI +LDEFDLFA+HKNQ+LLYNLFDI+QS Q P+ VIGLTCRLD++ELLEKRVKSR+SHR I    S+ F +YV I    L L  +FP K F ++WN N+ + LSE     E+L K +N+ K+ +SL  LL   +  ++   PF++  D +EA     +DSK  +++GLS LE+ L++A KH+ +  E +PFN++MVYNE++ F++R+   + NF K V  KA+EHL  LEL+K  E  S NS  +E++ M LLL+ +QI   + +YP CPT++RQWA S
Sbjct:  154 VIFILDEFDLFAHHKNQTLLYNLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEFPDKVFAEKWNENV-QYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAVDLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNS-QREYQLMKLLLDNTQIMNALQKYPNCPTDVRQWATS 431
The following BLAST results are available for this feature:
BLAST of TCONS_00050698-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ORC41.314e-9048.93Origin recognition complex subunit 4 OS=Homo sapie... [more]
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