TCONS_00050701-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050701-protein
Unique NameTCONS_00050701-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length605

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050701-protein ID=TCONS_00050701-protein|Name=TCONS_00050701-protein|organism=Clytia hemisphaerica|type=polypeptide|length=605bp
MVPDRPFLPPSVPRLPARAARYVEDGTRDSVPDTITANFSMSVSSVGPVT
TQDTSATDSFLLDSLPLQFSLPSSVASPIRVSNLEFLLSGYPPEIVEFLI
QGFSHGFRLGFGNSPLSHTGRNNSSATLVSDKVSASILKELERSHTAGPF
SNPPLPNLHCSPLGSALKNDGSSRIILDLSQPDGSSVNDGIPIDSCHVKY
SSFDDAVDLVRLVGRGCFMGKIDIRHAFRLCPVHPDDWHLLGYYWRSRWY
VDLRLPFGLRSSPFIFTTFSDALQWILVVKYHVTALVHYLDDFFVVGRTK
EECQYRMDLIVQVFEFLGVPIATDKFEGPSQKIVFLGIEIDSIDLTIRLP
DDKKNRLSSTIESWLVRKKCTKRDLLSLIGSLSFACKVIKPGRIFLRRLI
DLSTTVSKPHYHVSIPKSVRDDLNMWFTFLKSWNGKSFMLSPIVTSRSLS
LSTDASFLGYGSFFQGHWFSLPWPSSTAQHKGQPIHIAIRELFAIYAALT
CWRRFFSNQQILIFTDNESIVSVWASGTSKDPRIMCIVRALFFLSVDINA
SFTFQHVAGKDNTFSDLLSRLQVEKFRSICPASDQHPSAIPTSTMDLWDE
ILSIS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032125XLOC_032125Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050701TCONS_00050701Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR000477RT_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 446..576
e-value: 0.0013
score: 17.9
NoneNo IPR availableGENE3D3.30.70.270coord: 255..344
e-value: 6.7E-11
score: 41.6
NoneNo IPR availableGENE3D3.10.10.10coord: 123..254
e-value: 3.6E-4
score: 20.1
NoneNo IPR availableCDDcd03714RT_DIRS1coord: 222..340
e-value: 2.03832E-23
score: 95.1031
NoneNo IPR availableCDDcd09275RNase_HI_RT_DIRS1coord: 450..572
e-value: 1.08036E-21
score: 90.0351
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 136..525
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 247..340
e-value: 1.8E-8
score: 34.1
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 147..340
score: 10.741

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050701-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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