TCONS_00050730-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050730-protein
Unique NameTCONS_00050730-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1310

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050730-protein ID=TCONS_00050730-protein|Name=TCONS_00050730-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1310bp
MTNHRDQNNNFCISNRSISLEDSPQLQQLELQPIGIRASSDLNNNIIDQR
KSPTIYENSRVTYSQPFSVKNRRDTDKSHLKTEKFVTDEILKEQSNTKNK
IGKNRFKSDNSRQETSTIRHKADKNSSSKTENALSANDITLHGNIRLQND
IGRNHTEKVSNTKTDNIDSNDKRKMLVATHRQSMEDDNDSSTTTNFLNPC
NEDQFDERINHAILNEKRKVFGRSLSCDVLGKRSNTLHKPLMSILTQTIP
KVYKKRNLGYHYENETTGCHSNMNHVERTVNQFHCLDITPTIAWANEEDD
IINGSFRTPSIKQRAVNTTDFTPFAQVAYQPYYQQRQNIRNASRIVSDHT
GHDTTDSPDSNHHLRRRASSLDFLPEAINNSKVIQQAQQQYAQQNGGTQA
NHNNKASSPFARTTSMSQRSPFRKKVSYQAEQADNSISGVRELRPKGLKR
SKSGLDALFDAIERQEFSEVRRLITIHDVSLNELNGDSFTPLDVALMLNE
TDISNLLLHYGAKENPAFHEPKERTSHLESLIETAEENVNNYKTTLLNYT
GDTKENERQLREWEWRLYFLRIMQNGFTNAEPPSQPPIISTAPLSSDSIV
VTLNAPTSRENDTKEVITKYRVEWSKDENFNTMEGHELLEDKRHLCCTIP
SLPKNTTLYVRAQSGNHKGFSMYGYPEPRSVSPSSWHELDNSLPRYHGVS
DKLHHLVDDVLSVSRKQSDKSSDDGSDEDAPPCEAPPLRSPKTKNPSRKL
VKSMSKYTNLIFNSAPKLLKKIKGRGIYLAALLYNTDQSKVLVTMDENLP
VVECDDNHAKLFNQEFYWFSKTSCTWEDIQHMLYTSTKSHSSQSVHIRRK
LLESALVLMNATGVNDLGPIHDKPFRDEHGSVLLLAVNCVKKISSSKTMT
MKWIPVQKFLKKSTHSSNSDSVMVPERLIPCVQEQVCAHEGSRTKLPKGL
YLGYLKLRTSMDTLSIIVPNAHTNVLPHVKIQDVPNVTKDQWQWLKSFND
INGLVSNTKESNQSESMFERRLKIAIRKLFNALNISTDVALSHRVYDQEV
IELNSDVMFILIFPNEVCTPPNQSDNFSSSSAYSALPVQSFEMNNMMTYQ
PKLMSSYCRLSSILELENLSVQQAIRESICHDETRTLKNKQSRLSNYQQN
VDDLWKVSRWIFDTLQSCQEKNLNVGVPLNTLFGVTSWCDVINNRLSLTS
QASVNSIPCALSDRERDSESISSTETSNELPSPTSPSATATATATATATT
PVSLKIYGTEEIGFQATKYTTVTVDDNTTALDIVLLAARQFLLEPESLNS
EPIKELLSEX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032139XLOC_032139Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050730TCONS_00050730Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR020683Ankyrin_rpt-contain_dom
IPR013783Ig-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1130..1150
NoneNo IPR availableCOILSCoilCoilcoord: 532..552
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 583..671
e-value: 0.0017
score: 27.6
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 582..684
score: 13.286
IPR003961Fibronectin type IIICDDcd00063FN3coord: 583..671
e-value: 4.6862E-4
score: 39.0167
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 577..673
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 419..562
e-value: 1.8E-6
score: 27.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 453..515
score: 10.577
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 449..523
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 578..688
e-value: 1.7E-9
score: 37.2

Blast
[Close]
BLAST of TCONS_00050730-protein vs. Swiss-Prot (Human)
Match: ANKF1 (Ankyrin repeat and fibronectin type-III domain-containing protein 1 OS=Homo sapiens GN=ANKFN1 PE=2 SV=2)

HSP 1 Score: 359.762 bits (922), Expect = 2.356e-108
Identity = 207/654 (31.65%), Postives = 358/654 (54.74%), Query Frame = 0 
Query:  454 GLDALFDAIERQEFSEVRRLI---TIHDVSLNELNGDSFTPLDVALMLNETDISNLLLHYGAKENPAFHEPKERTSHLESLIETAEENVNNYKTTLLN--YTGDTKENERQLREWEWRLYFLRIMQNGFTNAEPPSQPPIISTAPLSSDSIVVTLNAPTSRENDTKEVITKYRVEWSKDENFNTMEGHELLEDKRHLCCTIPSLPKNTTLYVRAQSGNHKGFSMYGYPEPRSVSPSSWHELDNSLPRYHGVSDKLHHLVDDVLSVSRKQSDKSSDDGSDEDAPPCEAPPLRSPKTKNPSRKLVKSMSKYTNLIFNSAPKLLKKIKGRGIYLAALLYNTDQSKVLVTMDENLPVVECDDNHAKLFNQEFYWFSKTSCTWEDIQHMLYTSTKSHSSQSV-HIRRKLLESALVLMNATGVNDLGPIHDKPFRDEHGSVLLLAVNCVKKISSSKTMTMKWIPVQKFLKKSTHSSNSDSVMVPERLIPCVQEQVCAHEGSRTKLPKGLYLGYLKLRTSMDTLSIIVPNAHTNVLPHVKIQDVPNVTKDQWQWLKSFNDINGLVSNTKESNQSESMFERRLKIAIRKLFNALNISTDVALSHRVYDQEVIELNSDVMFILIFP--NEVCTPPNQSDNFSSSSAYSALPVQSFEMNNMMTY 1099
            G +A+F+A+E+Q+   V+ L+   T  ++ LN  N +  TPLD+A+M N   I+ +LL  GA+E+P F   + R  HL +L++ A+E V+     + N  +T D  E E+QL+ WEWR    R M+ GF +A  P  P  +     SS S+ V+   P S       V+T+Y+VEWS  E+F+ + G  ++++ + L CTI  L      +V+  + N KG+       P   SPS+W + D+  PR+ G S+ L  L+  V ++ +  S + S                   K +   RK  +S+S+    +F+S+ K +K +K RG+Y+A + Y  D   +LVT ++ +P+VE DD+H     Q+F WF+K SC WEDI+ +  +   S SS +V   R+K+L +   L N  G ++LG ++ +P +D HG++L++ +  V+ + S      KW+ + K   +    S  +     + L+  +Q+ +  H+ S  +L  GLYLGYLKL +S+D + ++V     N+L HVKI++  N+++++W+W++  +    + S    S+    +F   L++A++ L   +NI    A + R+Y QEV+E+  +V F+L+ P  ++VCT P Q++ ++  S +  LP+Q FE+  +  +
Sbjct:  137 GNEAMFEAVEQQDMDAVQILLYQYTPEELDLNTPNSEGLTPLDIAIMTNNVPIARILLRTGARESPHFVSLESRAMHLNTLVQEAQERVSELSAQVENEGFTLDNTEKEKQLKAWEWRYRLYRRMKTGFEHARAPEMPTNVCLMVTSSTSLTVSFQEPLSV---NAAVVTRYKVEWSMSEDFSPLAGEIIMDNLQTLRCTITGLTMGQQYFVQVSAYNMKGWGPAQTTTPACASPSNWKDYDDREPRHKGQSEVLEGLLQQVRALHQHYSCREST------------------KLQTTGRK--QSVSRSLKHLFHSSNKFVKTLK-RGLYIAVIFYYKD--NILVTNEDQVPIVEIDDSHTSSITQDFLWFTKLSCMWEDIRWLRQSIPISSSSSTVLQTRQKMLAATAQLQNLLGTHNLGRVYYEPIKDRHGNILIVTIREVEMLYS--FFNGKWMQISKLQSQRKSLSTPEEPTALDILLITIQDILSYHKRSHQRLFPGLYLGYLKLCSSVDQIKVLVTQKLPNILCHVKIRENNNISREEWEWIQKLSGSESMESVDHTSDCPMQLFFYELQMAVKALLQQINIPLHQARNFRLYTQEVLEMGHNVSFLLLLPASDDVCTAPGQNNPYTPHSGFLNLPLQMFELGIVACF 762
The following BLAST results are available for this feature:
BLAST of TCONS_00050730-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANKF12.356e-10831.65Ankyrin repeat and fibronectin type-III domain-con... [more]
back to top