TCONS_00052259-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052259-protein
Unique NameTCONS_00052259-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length658

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052259-protein ID=TCONS_00052259-protein|Name=TCONS_00052259-protein|organism=Clytia hemisphaerica|type=polypeptide|length=658bp
MFQHCNHVKILIFIIFITSTFGEQWQEPTTKAPVPKAQEHVGHPGHEIPR
DPTTKAPIISTTPKVDDPVITNLAVMEAKTTTAQVTTQSRALKESTKTQG
PSVSTSIKINPDPTGTKLLPEDLNHGGRRHIHTEYGTVYATAGPIPTKTL
PTTKEQASPTTVSPKVSTADFFQTLPTSTTTVKTKRPIKFAKQEHVRMSK
ADVKQFMRRSNREKEQELILCGINDRKYLEAIKEHIGKEEVVKYNSLCGA
NITVAFSELPPLVYTNETDRTVHGILPELLKEGLIDRCCLGYNNLHFIRK
TYSDKFVDQFRPLNESQIVLPVENNKDEGLILGFKYSPLIHFKSIKFFSK
KQEKGHVEILRNLAQSTLETWPLFVVAMALTLLAGTIIWIMENMTNSKEF
PKRFPHGIFDGFWWAFISMTTVGYGDKSPLTFLGRTFAVFWIVIGITITS
LYVATLTSVLTMELSGERPLIISGKNVGVLSNPVHTMRAVKLHRGIPIRY
ASFEDMMRALKKGNIEAFAIDDMTYKIKADDISRLGNDVKVGIEHKFDSQ
SIGFTAINETLIMMNKAFLEAYMDAPNIEINKELIDSGMLEKKPVQLFSA
NDKRFIKIIIVAFPAIFLFGIVGLLLIKIKDCTFGSGTSHLERIIMESKE
PGEKLKYR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033071XLOC_033071Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052259TCONS_00052259Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001320Iontro_rcpt
IPR013099K_chnl_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004970ionotropic glutamate receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0004970 ionotropic glutamate receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001320Ionotropic glutamate receptorPFAMPF00060Lig_chancoord: 370..463
e-value: 2.1E-8
score: 34.0
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 380..461
e-value: 7.7E-15
score: 54.5
NoneNo IPR availableGENE3D1.10.287.70coord: 364..568
e-value: 1.1E-25
score: 89.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..57
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 360..473

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052259-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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