TCONS_00052344-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052344-protein
Unique NameTCONS_00052344-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length419

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052344-protein ID=TCONS_00052344-protein|Name=TCONS_00052344-protein|organism=Clytia hemisphaerica|type=polypeptide|length=419bp
MQRKRRETSERDDSKLYRPRRNVNLEPETRGPFYIKLFILMDTKLYDMYD
GKRDDKVFKARIQKIVDYANTVYRKYNIRMSIAKFLDPPNDHQVQFTSNS
GDYLSRISLHFASTRKNKSFKEIDHLHFFTGHHFDDDVIGKAYYRSMCAP
STSVSFSSDSPHWDVQRTASIFVHEIGHSLGMVHDDPTNCVCKHSRGCIM
ASYIVTPAPRYFSDCSEEGLFKYLDSWRSQCLRGDGSPVPEERLVPRPKP
VCGDGKLDKNEECDCGIPGFCMNPCCNPYTCKLTKGSECYEGGCCKHCKL
KTKGTVCRQSFDDCDLPDMCNGQSPICSNLHKEDGTACIYSGKCRGGKCK
SRTVQCERIFGKGTMNGPYTCYTRINKVGKDFGNCGNKGSVYKACSQADA
ECGKLQCKSPTVNVMPISX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033095XLOC_033095Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052344TCONS_00052344Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001762Disintegrin_dom
IPR006586ADAM_Cys-rich
IPR001590Peptidase_M12B
IPR024079MetalloPept_cat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001762Disintegrin domainPRINTSPR00289DISINTEGRINcoord: 318..330
score: 43.47
coord: 289..308
score: 52.09
IPR001762Disintegrin domainSMARTSM00050DISIN_2coord: 258..332
e-value: 2.1E-26
score: 103.7
IPR001762Disintegrin domainPFAMPF00200Disintegrincoord: 258..328
e-value: 4.9E-17
score: 62.4
IPR001762Disintegrin domainGENE3D4.10.70.10coord: 262..331
e-value: 1.8E-20
score: 72.9
IPR001762Disintegrin domainPROSITEPS50214DISINTEGRIN_2coord: 249..334
score: 17.322
IPR001762Disintegrin domainSUPERFAMILY57552Blood coagulation inhibitor (disintegrin)coord: 258..328
IPR006586ADAM, cysteine-richSMARTSM00608acrcoord: 333..414
e-value: 2.5E-12
score: 56.9
IPR006586ADAM, cysteine-richPFAMPF08516ADAM_CRcoord: 334..411
e-value: 1.3E-19
score: 70.6
IPR001590Peptidase M12B, ADAM/reprolysinPFAMPF01421Reprolysincoord: 34..233
e-value: 5.6E-34
score: 117.7
IPR001590Peptidase M12B, ADAM/reprolysinPROSITEPS50215ADAM_MEPROcoord: 33..236
score: 28.471
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 29..261
e-value: 7.6E-39
score: 133.2
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 31..233

Blast
[Close]
BLAST of TCONS_00052344-protein vs. Swiss-Prot (Human)
Match: ADAM9 (Disintegrin and metalloproteinase domain-containing protein 9 OS=Homo sapiens GN=ADAM9 PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 2.445e-58
Identity = 139/423 (32.86%), Postives = 203/423 (47.99%), Query Frame = 0 
Query:    4 KRRETSERDDSKLYRPRRNVNLEPETRGPFYIKLFILMDTKLYDMYDGKRDDKVFKARIQKIVDYANTVYRKYNIRMSIAKFLDPPNDHQVQFTSNSGDYLSRISL---HFASTRKNKSFKEIDHLHFFTGHHFDDDVIGKAYYRSMCAPSTSVSFSSDSPHWDVQRTASIFVHEIGHSLGMVHDDPTNCVCKHSRGCIMASYIVTPAPRYFSDCSEEGLFKYLDSWRSQCLRGDGSPVPEERLVPRPKPVCGDGKLDKNEECDCGIPGFC-MNPCCNPYTCKLTKGSECYEGGCCKHCKLKTKGTVCRQSFDDCDLPDMCNGQSPICS-NLHKEDGTACIYS-GKCRGGKCKSRTVQCERIFGKGTMNGPYTCYTRINKVGKDFGNCGNKGSVYKACSQADAECGKLQCKS----PTVNVMP 416
            K  E      ++L R RR V   P+TR   Y++LFI++D + YDM    R+    +  +  + +Y +++Y   NIR+ +       N + +     +GD L         F  TR+     ++     F G        G A+  ++C+ S +   +       V+  ASI  HE+GH+LGM HDD  +C C  ++ CIM S       R FS CS E   K   +    CL     P P+E       P CG+  +D  EECDCG P  C ++PCC   TCKL   +EC  G CCK C+    GT+CR    +CD+P+ CNG S  C  ++  ++G  C  +   C  G C+    QC+ IFG      P  C+  +N  G  FGNCG  G+ YK C+  +A CGKLQC++    P   ++P
Sbjct:  188 KDEEEEPPSMTQLLRRRRAV--LPQTR---YVELFIVVDKERYDMMG--RNQTAVREEMILLANYLDSMYIMLNIRIVLVGLEIWTNGNLINIVGGAGDVLGNFVQWREKFLITRRRHDSAQLVLKKGFGG------TAGMAFVGTVCSRSHAGGINVFG-QITVETFASIVAHELGHNLGMNHDDGRDCSCG-AKSCIMNS--GASGSRNFSSCSAEDFEKLTLNKGGNCLLN--IPKPDEAY---SAPSCGNKLVDAGEECDCGTPKECELDPCCEGSTCKLKSFAECAYGDCCKDCRFLPGGTLCRGKTSECDVPEYCNGSSQFCQPDVFIQNGYPCQNNKAYCYNGMCQYYDAQCQVIFGSKAKAAPKDCFIEVNSKGDRFGNCGFSGNEYKKCATGNALCGKLQCENVQEIPVFGIVP 588
The following BLAST results are available for this feature:
BLAST of TCONS_00052344-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ADAM92.445e-5832.86Disintegrin and metalloproteinase domain-containin... [more]
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