TCONS_00052350-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052350-protein
Unique NameTCONS_00052350-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length194

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052350-protein ID=TCONS_00052350-protein|Name=TCONS_00052350-protein|organism=Clytia hemisphaerica|type=polypeptide|length=194bp
VLEESLTYKKKCEELLRTEAELRAQLALYTEKFEEFQTTLTKSNEVFATF
KKDMDTMTKTIRKLEKESNMWKNRWENTNHSLLQMVDERTQNQQTISSQK
TKIEKLERLCRALQVERKSLRQQLDEHKPVDNGLATDSPDQSLDVSDPSV
SSTTPSPTPETTALPDTNAERAVSDEKPKSEETESETTDETNNE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033098XLOC_033098Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052350TCONS_00052350Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026183Taxilin_fam
Vocabulary: Molecular Function
TermDefinition
GO:0019905syntaxin binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0019905 syntaxin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 96..123
NoneNo IPR availableCOILSCoilCoilcoord: 47..74
NoneNo IPR availableCOILSCoilCoilcoord: 12..32
NoneNo IPR availableGENE3D1.20.120.330coord: 2..134
e-value: 7.2E-7
score: 28.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..194
IPR026183Taxilin familyPFAMPF09728Taxilincoord: 2..116
e-value: 2.8E-42
score: 145.0

Blast
[Close]
BLAST of TCONS_00052350-protein vs. Swiss-Prot (Human)
Match: TXLNA (Alpha-taxilin OS=Homo sapiens GN=TXLNA PE=1 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 5.883e-39
Identity = 74/182 (40.66%), Postives = 116/182 (63.74%), Query Frame = 0 
Query:    1 VLEESLTYKKKCEELLRTEAELRAQLALYTEKFEEFQTTLTKSNEVFATFKKDMDTMTKTIRKLEKESNMWKNRWENTNHSLLQMVDERTQNQQTISSQKTKIEKLERLCRALQVERKSLRQQLDEHKPVDNGLATDSPDQSLDVSDPSVSSTTPSPT--PETTALPDTNAERAVSDEKPKS 180
            +L+E++  ++ CE + + E  L+ QLALYTEKFEEFQ TL+KS+EVF TFK++M+ MTK I+KLEKE+ M+++RWE++N +LL+M +E+T   + +   + KI++LE+LCRALQ ER  L +++ +      G  TDS  +       + + ++P  T  P     P T A      ++P S
Sbjct:  362 LLKEAVESQRMCELMKQQETHLKQQLALYTEKFEEFQNTLSKSSEVFTTFKQEMEKMTKKIKKLEKETTMYRSRWESSNKALLEMAEEKTVRDKELEGLQVKIQRLEKLCRALQTERNDLNKRVQDLSAGGQGSLTDSGPERRPEGPGAQAPSSPRVTEAPCYPGAPSTEASGQTGPQEPTS 543
The following BLAST results are available for this feature:
BLAST of TCONS_00052350-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TXLNA5.883e-3940.66Alpha-taxilin OS=Homo sapiens GN=TXLNA PE=1 SV=3[more]
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