TCONS_00052403-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052403-protein
Unique NameTCONS_00052403-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length412

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052403-protein ID=TCONS_00052403-protein|Name=TCONS_00052403-protein|organism=Clytia hemisphaerica|type=polypeptide|length=412bp
MLSHLASLFDGIIWLVCDVTFWCFRFVEIVPQTFSLIHESVRVILNLNHV
LCSRIFHTLGFIKYTIQTTQTFTVDLITNTINGFFGLPFTLYHGLTSLLT
NLKDLFIAIIQCTIEFIATFFFGIKTSLSNSLDTAWHSVMDVGYDSQTIL
EQFASTCFKESCEFFNVMIKFIATLSKSTWGVTTTVGYLFLDFIKCIAVF
LESHINSLGNWVLYLFIFWPLQLVANFGEIMLSTGANLWTSIEEFCYWCY
SNTVYLCGAINHLVVMFYVFLKGIFMFPLELSQAVISKLSRLEILIAIFC
MLCVSVLIFNSELTLKLFQFLRFGSGLNTGHNHRERFWFWPFNLFSHRTD
DGNRDILDCVICQDKKRTILLLPCRHLCLCTNCMNRIRDMRVALQTCPLC
RSRIENYINVYM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033128XLOC_033128Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052403TCONS_00052403Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 359..400
e-value: 0.001
score: 28.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 359..401
score: 11.648
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 358..404
e-value: 2.83854E-4
score: 37.4252
NoneNo IPR availableGENE3D1.10.1170.10coord: 245..412
e-value: 2.7E-13
score: 49.9
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 358..406
e-value: 4.0E-13
score: 48.9
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 354..407

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052403-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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