TCONS_00052450-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052450-protein
Unique NameTCONS_00052450-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length191

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052450-protein ID=TCONS_00052450-protein|Name=TCONS_00052450-protein|organism=Clytia hemisphaerica|type=polypeptide|length=191bp
MAGELDRQYKLVVVGGGGVGKSALTIQFIQSHFVQDYDPTIEDSYRKQCV
IDDRVAHLDILDTAGQEEFSAMREQYMRTGEGFLLVFSVTDKSSFDEIPR
FHTQILRVKDKDEFPMILVGNKSDLENERTVSTAEAQELGRKLKISYLES
SAKQRINVDAAFHDLVRSIRRSNEVIESPVKGKKKKKCIIL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033169XLOC_033169Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052450TCONS_00052450Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR020849Small_GTPase_Ras
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0016020 membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 9..30
score: 51.25
coord: 112..125
score: 53.85
coord: 49..71
score: 45.0
coord: 32..48
score: 35.79
coord: 147..169
score: 41.37
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 6..172
e-value: 2.0E-124
score: 429.3
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 11..172
e-value: 6.8E-12
score: 32.6
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 9..172
e-value: 1.4E-35
score: 134.2
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 14..191
e-value: 0.0024
score: -0.6
NoneNo IPR availableGENE3D3.40.50.300coord: 72..170
e-value: 7.5E-32
score: 108.9
NoneNo IPR availableGENE3D3.30.70.1390coord: 7..71
e-value: 1.8E-22
score: 78.6
NoneNo IPR availableCDDcd04145M_R_Ras_likecoord: 7..170
e-value: 2.8519E-104
score: 298.938
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 7..163
e-value: 4.6E-33
score: 112.3
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 10..170
e-value: 2.8E-58
score: 196.0
IPR020849Small GTPase superfamily, Ras typePROSITEPS51421RAScoord: 4..191
score: 46.89
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..187

Blast
[Close]
BLAST of TCONS_00052450-protein vs. Swiss-Prot (Human)
Match: RRAS2 (Ras-related protein R-Ras2 OS=Homo sapiens GN=RRAS2 PE=1 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 1.461e-84
Identity = 133/196 (67.86%), Postives = 158/196 (80.61%), Query Frame = 0 
Query:    3 GELDRQYKLVVVGGGGVGKSALTIQFIQSHFVQDYDPTIEDSYRKQCVIDDRVAHLDILDTAGQEEFSAMREQYMRTGEGFLLVFSVTDKSSFDEIPRFHTQILRVKDKDEFPMILVGNKSDLENERTVSTAEAQELGRKLKISYLESSAKQRINVDAAFHDLVRSIRR--SNEVIESPVKGKKKK-----KCIIL 191
            G    +Y+LVVVGGGGVGKSALTIQFIQS+FV DYDPTIEDSY KQCVIDDR A LDILDTAGQEEF AMREQYMRTGEGFLLVFSVTD+ SF+EI +F  QILRVKD+DEFPMIL+GNK+DL+++R V+  E Q+L R+LK++Y+E+SAK R+NVD AFH+LVR IR+    E   SP   +K+K      C+I 
Sbjct:    9 GSGQEKYRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRVIRKFQEQECPPSPEPTRKEKDKKGCHCVIF 204
The following BLAST results are available for this feature:
BLAST of TCONS_00052450-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RRAS21.461e-8467.86Ras-related protein R-Ras2 OS=Homo sapiens GN=RRAS... [more]
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