TCONS_00053029-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053029-protein
Unique NameTCONS_00053029-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length563

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053029-protein ID=TCONS_00053029-protein|Name=TCONS_00053029-protein|organism=Clytia hemisphaerica|type=polypeptide|length=563bp
MRMLVNNYLLVILMLAPIPYVLLKETPKECGIVLLQKENDSHCLKERRRN
LLFQKQFFQITKPEDHTIYETNANSIGFHKILPTVPWLNRSKEEMVAYYS
FNDEDSRYMGMFAAYINFLKTVEKKVRDTFFIALRNTTDVPSFQFYERIN
RAFDGSVKKLNTLYVSNPCHNKECLKETSQQYNPLDDEMFVQRRLAGPCP
FNLKQVSTNGPTGILLSTLKRKMNLDFDYDQALTRALGKRTTLAKAVNNG
LVFVLYHPEIDHITASSPFSDPAQERTFRKMNNPIVFFILTDDGFLKIVS
IQRDSEKDSEVLQPIESDPEEWLKVKGDAEMADSNYCQGFYHSGKIHLVS
TIYCLAYRRHIDKNHPLYDFFLYHCEGTVPHISLVYHTLLTSNERSDASL
GMGHQGFLQLGTKAFNSRMYGELDLPFFLKRKGLDNKRIKYYPFRDDAEV
LWEELAGFTNDVISEIYKTDDEVSQDPSLQSFATELSSKDAGNMAGFPTY
FESKQSIRLFLLRFLWFNVIHTSLNYPLNMHSQTFSPTKSYQNIQREPFS
TYLQTLPDLYTAV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033492XLOC_033492Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053029TCONS_00053029Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013819LipOase_C
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.60coord: 215..333
e-value: 4.5E-7
score: 29.6
NoneNo IPR availableGENE3D1.20.245.10coord: 334..563
e-value: 2.1E-34
score: 118.7
IPR013819Lipoxygenase, C-terminalPFAMPF00305Lipoxygenasecoord: 185..526
e-value: 8.7E-16
score: 57.4
IPR013819Lipoxygenase, C-terminalPROSITEPS51393LIPOXYGENASE_3coord: 116..563
score: 35.513
IPR013819Lipoxygenase, C-terminalSUPERFAMILY48484Lipoxigenasecoord: 97..562

Blast
[Close]
BLAST of TCONS_00053029-protein vs. Swiss-Prot (Human)
Match: LOX5 (Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALOX5 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.597e-20
Identity = 72/296 (24.32%), Postives = 136/296 (45.95%), Query Frame = 0 
Query:  236 ALGKRTTLAKAVNNGLVFVLYHPEIDHITASSPFSDPAQERTFRKMNNPIVFFILTDDGFLKIVSIQRDSEKDSEVLQPIESDPE-EWLKVKGDAEMADSNYCQGFYHSGKIHLVSTIYCLAYRRHIDKNHPLYDFFLYHCEGTVPHISLVYHTLLTSNERSDASLGMGHQGFLQLGTKAFNSRMYGELDLPFFLKRKGLDNKR-IKYYPFRDDAEVLWEELAGFTNDVISEIYKTDDEVSQDPSLQSFATE--LSSKDAGNMAGFPTYFESKQSIRLFLLRFLW-FNVIHTSLNY 526
            +L ++ +L + V  G +F++    +D I A+   +DP    T + +  PI          +  ++IQ +     E    + SD + +WL  K     +D +  Q   H  + HLVS ++ +A  R +   HP++   + H   T+   +     L+      D +   G  G +Q+  +A     Y  L  P  +K +G+++K  I YY +RDD  ++WE +  FT +V+   Y+ D  V +DP LQ F  +  +        +GFP   +S++ +  +L   ++  +  H ++N+
Sbjct:  266 SLERQLSLEQEVQQGNIFIVDFELLDGIDANK--TDPC---TLQFLAAPICLLYKNLANKIVPIAIQLNQIPGDENPIFLPSDAKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYASLCFPEAIKARGMESKEDIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNF 556
The following BLAST results are available for this feature:
BLAST of TCONS_00053029-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LOX51.597e-2024.32Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALO... [more]
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