TCONS_00053069-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053069-protein
Unique NameTCONS_00053069-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length268

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053069-protein ID=TCONS_00053069-protein|Name=TCONS_00053069-protein|organism=Clytia hemisphaerica|type=polypeptide|length=268bp
MSQSIPYRNSISYESERKEREKEVMRQIKEKIIASRQGSITKARVAVFGC
GRVGKTSIIKRYLYEEFDHNYYETIEDIHKKVVFCNNQSIELTVLDTAGN
YQFPAMRELAIKQSNGFILVYAIDNVPSFEEAIRLRDIIVSVKNNEDTPI
LLVGNKTDAGFRRVQRVEASAAMKDWGSKAQHIETSAKNNENIDLLFNSL
IAMIDEQNNEQLELSTFKDATRYRFSSMRQSVRNSTRRASAKTLSFVRRE
KSQTQPMVNGRKTLQSIS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033517XLOC_033517Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053069TCONS_00053069Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR020849Small_GTPase_Ras
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0016020 membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 66..82
score: 26.19
coord: 182..204
score: 35.04
coord: 146..159
score: 49.04
coord: 43..64
score: 29.38
coord: 83..105
score: 30.43
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 53..207
e-value: 2.0E-9
score: 7.9
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 45..207
e-value: 9.7E-9
score: -6.7
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 40..207
e-value: 3.4E-47
score: 172.8
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 48..252
e-value: 6.7E-4
score: 7.0
NoneNo IPR availableGENE3D3.40.50.300coord: 33..252
e-value: 3.8E-38
score: 130.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 249..268
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 42..198
e-value: 8.8E-22
score: 75.6
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 45..204
e-value: 3.1E-36
score: 124.3
IPR020849Small GTPase superfamily, Ras typePROSITEPS51421RAScoord: 38..268
score: 22.054
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 43..207

Blast
[Close]
BLAST of TCONS_00053069-protein vs. Swiss-Prot (Human)
Match: DIRA2 (GTP-binding protein Di-Ras2 OS=Homo sapiens GN=DIRAS2 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 3.987e-37
Identity = 68/162 (41.98%), Postives = 100/162 (61.73%), Query Frame = 0 
Query:   44 RVAVFGCGRVGKTSIIKRYLYEEFDHNYYETIEDIHKKVVFCNNQSIELTVLDTAGNYQFPAMRELAIKQSNGFILVYAIDNVPSFEEAIRLRDIIVSVKNN-EDTPILLVGNKTD-AGFRRVQRVEASAAMKDWGSKAQHIETSAKNNENIDLLFNSLIAM 203
            RVAVFG G VGK+S++ R++   F  +Y  T+ED +++V+ C+     L + DT G++QFPAM+ L+I + + FILVY+I +  S EE   + + I  +K + E  PI+LVGNK D +  R VQ  EA A  + W  K   +ETSAK N N+  LF  L+ +
Sbjct:    9 RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPSREVQSSEAEALARTW--KCAFMETSAKLNHNVKELFQELLNL 168
The following BLAST results are available for this feature:
BLAST of TCONS_00053069-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DIRA23.987e-3741.98GTP-binding protein Di-Ras2 OS=Homo sapiens GN=DIR... [more]
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