TCONS_00053331-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053331-protein
Unique NameTCONS_00053331-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length321

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053331-protein ID=TCONS_00053331-protein|Name=TCONS_00053331-protein|organism=Clytia hemisphaerica|type=polypeptide|length=321bp
MSSSESEDEDFVFYRDRKEWNDITPIKQDDGPYPVVSIAYSEKFIDVFDY
FRAILKKNEISDRAFDLVTDAITLNAANYTVWHFRRVLLQELKKDLRVEL
DYITDVIREQPKNYQVWYHRGIIVKWLKDSSFELDFTREMLHIDAKNYHC
WQHRQLVLNHFKLWEGEVELTTILLEKDLRNNSAWNQRYYAIVNTTSFVR
ETMECEVGYAIQMIKKAPNNESAWNYLKGILSAADGLHQYPALKDDFEKM
LCDGMDSPYLLSFLVDYYEEDLENNGVNEISFKRAKELCAQLSSDVDVIR
KEYWDYMSRSLNSRFPVTWSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033655XLOC_033655Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053331TCONS_00053331Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002088Prenyl_trans_a
Vocabulary: Molecular Function
TermDefinition
GO:0008318protein prenyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0018342protein prenylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0018342 protein prenylation
molecular_function GO:0008318 protein prenyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002088Protein prenyltransferase, alpha subunitPFAMPF01239PPTAcoord: 167..190
e-value: 5.2E-5
score: 22.7
coord: 133..160
e-value: 6.7E-10
score: 38.3
coord: 99..121
e-value: 6.2E-8
score: 32.0
coord: 65..90
e-value: 1.6E-7
score: 30.7
coord: 207..232
e-value: 1.6E-5
score: 24.3
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 202..236
score: 11.895
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 164..197
score: 11.859
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 95..128
score: 12.036
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 129..163
score: 15.895
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 60..94
score: 16.143
NoneNo IPR availableGENE3D1.25.40.120coord: 13..314
e-value: 1.8E-34
score: 118.7
NoneNo IPR availableSUPERFAMILY48439Protein prenylyltransferasecoord: 7..311

Blast
[Close]
BLAST of TCONS_00053331-protein vs. Swiss-Prot (Human)
Match: FNTA (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Homo sapiens GN=FNTA PE=1 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 1.634e-117
Identity = 174/306 (56.86%), Postives = 221/306 (72.22%), Query Frame = 0 
Query:   11 FVFYRDRKEWNDITPIKQDDGPYPVVSIAYSEKFIDVFDYFRAILKKNEISDRAFDLVTDAITLNAANYTVWHFRRVLLQELKKDLRVELDYITDVIREQPKNYQVWYHRGIIVKWLKDSSFELDFTREMLHIDAKNYHCWQHRQLVLNHFKLWEGEVELTTILLEKDLRNNSAWNQRYYAIVNTTSFV-RETMECEVGYAIQMIKKAPNNESAWNYLKGILSAADGLHQYPALKDDFEKMLCDGMDSPYLLSFLVDYYEEDLENNGVN-EISFKRAKELCAQLSSDVDVIRKEYWDYMSRSLNSR 314
            +V YRDR EW DI P+ Q+DGP PVV I YS+KF DV+DYFRA+L+++E S+RAF L  DAI LNAANYTVWHFRRVLL+ L+KDL  E++YIT +I EQPKNYQVW+HR ++V+WL+D S EL+F  ++L+ DAKNYH WQHRQ V+  FKLW+ E++    LL++D+RNNS WNQRY+ I NTT +  R  +E EV Y ++MIK  P+NESAWNYLKGIL    GL +Y     +    L     SPYL++FLVD YE+ LEN   N E    +A ELC  L+ + D IRKEYW Y+ RSL S+
Sbjct:   63 YVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDR-GLSKY-PNLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIGRSLQSK 366
The following BLAST results are available for this feature:
BLAST of TCONS_00053331-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FNTA1.634e-11756.86Protein farnesyltransferase/geranylgeranyltransfer... [more]
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