TCONS_00053439-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00053439-protein
Unique Name	TCONS_00053439-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	349

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00053439-protein ID=TCONS_00053439-protein|Name=TCONS_00053439-protein|organism=Clytia hemisphaerica|type=polypeptide|length=349bp
MSSWAALFLFSLLTGITILYCAFQLYPAGTRFVSRNRALVQDDSSRDFIP
NPVQQQRLNYLRHFCQAKRKKDGGTSLRTFIQQRFLEREQKGHIFVSRVL
PVLYCAVPKVASTNWKRMLLLFDGIKSNISEMGVKSKVHTQRGLRPLYHV
KGHAMPKVIKDSFKFMFVRHPFERLASAYRNKFADNNTYFEKTYGSRILK
MFRKDLSKEEYNRGRGATFQEFVRWIVQVEPYDPHWYPATKLCHPCQIRY
NFIGKMESLLRDAKEVVRRVDSVHKFPKTWTDGYKVSSNDLMFHLFSTLD
EKDILGIYKYYKEDFDAFDYGLPRIQHSYNNKNNLLLRTLKKILNGKLT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_033736	XLOC_033736	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00053439	TCONS_00053439	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005331	Sulfotransferase
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0008146	sulfotransferase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008146	sulfotransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005331	Sulfotransferase	PFAM	PF03567	Sulfotransfer_2	coord: 93..320 e-value: 1.2E-42 score: 146.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 101..320

Blast

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BLAST of TCONS_00053439-protein vs. Swiss-Prot (Human)
Match: CHSTB (Carbohydrate sulfotransferase 11 OS=Homo sapiens GN=CHST11 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.392e-43
Identity = 87/254 (34.25%), Postives = 140/254 (55.12%), Query Frame = 0

Query:   82 QQRFLEREQKGHIFVSRVLPVLYCAVPKVASTNWKRMLLLFDGIKSNISEMGVKS-KVHTQRGLRPLYHVKGHAMPKV---IKDSFKFMFVRHPFERLASAYRNKFADN-NTYFEKTYGSRILKMFRKDLSKEEYNRGRGATFQEFVRWIV-----QVEPYDPHWYPATKLCHPCQIRYNFIGKMESLLRDAKEVVRR--VDSVHKFPKTWTDGYKVSSNDLMFHLFSTLDEKDILGIYKYYKEDFDAFDYGLP 323
            ++R L      H+ V     ++YC VPKVA TNWKR++++  G       M + + + H    L+ L     +++P++   +K   KF+FVR PFERL SAYRNKF    N  F K YG++I+K  RK+ ++E   +G    F+EFV +++     + EP++ HW     LCHPC I Y+ +GK E+L  D+  V++   V S  KFP T+    + +++++    F  +  +    +Y+ YK DF  F+Y +P
Sbjct:   98 KRRVLTPNDLKHLVVDEDHELIYCYVPKVACTNWKRLMMVLTGRGKYSDPMEIPANEAHVSANLKTL---NQYSIPEINHRLKSYMKFLFVREPFERLVSAYRNKFTQKYNISFHKRYGTKIIKRQRKNATQEALRKGDDVKFEEFVAYLIDPHTQREEPFNEHWQTVYSLCHPCHIHYDLVGKYETLEEDSNYVLQLAGVGSYLKFP-TYAKSTR-TTDEMTTEFFQNISSEHQTQLYEVYKLDFLMFNYSVP 346

The following BLAST results are available for this feature:

BLAST of TCONS_00053439-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00053439-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CHSTB	2.392e-43	34.25	Carbohydrate sulfotransferase 11 OS=Homo sapiens G...	[more]

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TCONS_00053439-protein (polypeptide) - C. hemisphaerica