TCONS_00053680-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053680-protein
Unique NameTCONS_00053680-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length610

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053680-protein ID=TCONS_00053680-protein|Name=TCONS_00053680-protein|organism=Clytia hemisphaerica|type=polypeptide|length=610bp
MFSKSEDLNLAFSGAGFMGIYHIGVVSCLKFYGKKLLENIECVGGSSAGA
LTACMLLCDTDLEASVQFTMHLASKVHGKVLGPLSPEFEPCEKIRKTFMT
HLPSDAYKKVSGKLYVSLTRVSDWENVIVSDFASNKELVDALVCTSFIPF
FSGVLPPKFRGVSYIDGGFTDNMPQHFNGITITISPFGGESDICPNDTHK
SQTNFDMRNTSIQFTSHNIYRMTRALFPPDNDVLSEMCRQGYRDTLRYLH
NNYPEMLSFDVAIVSIPQCCGFATETSDDEGSICSCGNTTSSCFSDMEHT
IAKGNMIDNLVTVPDQLNKILLQTKILFQQSDLCWYFIRTFSNIAQWIAK
PCIYATEHVSEFLKELFHYMIPRIRELCAYNFYTKKAFDIAFEVIQAYQD
KVNFEWHPSMKEEHHNEVEKKKRRILTAQKSLVTIPIVKADSLLKINEEK
SGLDAPPPSRVSSFVKLTDLDIVSKLNSYVFDEQGLFSDHSPSPDLTEED
DYLAEVDEDGKTMFCVKDDDGLVLKFDRSQSTYDPDDYGSELQLYPDPVY
DTLVVGQKRRKFSFDSDVDSWDDFVEINGXIQFMMHWLWVRNEGNFRLIL
MSILGMILWR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033856XLOC_033856Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053680TCONS_00053680Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002641PNPLA_dom
IPR016035Acyl_Trfase/lysoPLipase
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0008152metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006629 lipid metabolic process
biological_process GO:0008152 metabolic process
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002641Patatin-like phospholipase domainPFAMPF01734Patatincoord: 10..69
e-value: 1.8E-10
score: 41.2
IPR002641Patatin-like phospholipase domainPROSITEPS51635PNPLAcoord: 10..179
score: 33.238
NoneNo IPR availableGENE3D3.40.1090.10coord: 2..177
e-value: 5.1E-26
score: 91.0
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..28
score: 5.0
IPR016035Acyl transferase/acyl hydrolase/lysophospholipaseSUPERFAMILY52151FabD/lysophospholipase-likecoord: 9..260

Blast
[Close]
BLAST of TCONS_00053680-protein vs. Swiss-Prot (Human)
Match: PLPL2 (Patatin-like phospholipase domain-containing protein 2 OS=Homo sapiens GN=PNPLA2 PE=1 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 2.350e-76
Identity = 136/345 (39.42%), Postives = 208/345 (60.29%), Query Frame = 0 
Query:    1 MFSKSEDLNLAFSGAGFMGIYHIGVVSCLKFYGKKLLENIECVGGSSAGALTACMLLCDTDL-EASVQFTMHLASKVHGKVLGPLSPEFEPCEKIRKTFMTHLPSDAYKKVSGKLYVSLTRVSDWENVIVSDFASNKELVDALVCTSFIPFFSGVLPPKFRGVSYIDGGFTDNMPQHFNGITITISPFGGESDICPNDTHKSQTNFDMRNTSIQFTSHNIYRMTRALFPPDNDVLSEMCRQGYRDTLRYLHNNYPEMLSFDVAIVSIPQCCGFATETSDDEGSICSCGNTTSSCFSDMEHTIAKGNMIDNLVTVPDQLNKILLQTKILFQQSDLCWYFIRTFSNI 344
            MF + +  N++F+G GF+G+Y++GV SCL+ +   L+ N   + G+SAGALTA  L+    L EA  +F + ++ +   + LGPL P F   + IR   +  LP+D+++  SG+L +SLTRVSD ENVI+S F S  EL+ A VC+ FIP + G++PP  +GV Y+DGG +DN+P +    TIT+SPF GESDICP D+  +     + NTSIQF   N+YR+++ALFPP+  VL EMC+QGYRD LR+L  N   +L+    ++++P       E  D            S+   D      + +++++L   P +LN+ LL+  +  + +DL    + T SN+
Sbjct:    1 MFPREKTWNISFAGCGFLGVYYVGVASCLREHAPFLVANATHIYGASAGALTATALVTGVCLGEAGAKF-IEVSKEARKRFLGPLHPSFNLVKIIRSFLLKVLPADSHEHASGRLGISLTRVSDGENVIISHFNSKDELIQANVCSGFIPVYCGLIPPSLQGVRYVDGGISDNLPLYELKNTITVSPFSGESDICPQDSSTNIHELRVTNTSIQFNLRNLYRLSKALFPPEPLVLREMCKQGYRDGLRFLQRN--GLLNRPNPLLALPPARPHGPEDKDQA--------VESAQAEDYSQLPGEDHILEHL---PARLNEALLEACV--EPTDL----LTTLSNM 325
The following BLAST results are available for this feature:
BLAST of TCONS_00053680-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PLPL22.350e-7639.42Patatin-like phospholipase domain-containing prote... [more]
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