TCONS_00053697-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053697-protein
Unique NameTCONS_00053697-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length343

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053697-protein ID=TCONS_00053697-protein|Name=TCONS_00053697-protein|organism=Clytia hemisphaerica|type=polypeptide|length=343bp
MWSFMLVVCRVFFSTVSGGQIYPSNEVQSVALNSDFHKNWTIQPAPNEEA
KSIILYYHSGEKDPKVAWHGSVTKLGKSTFNGSLNVNIIENTEVVVEFSN
IQEAMVLYLMVHFVDDKSGEMHAFYSNVKIVLKVNGEWANWGSWNACSLT
CNTGKQTRRRRCTDPSPENGGIDCRGLKIETKNCFIRRCVPVGYAKVTVQ
PICYKPSYRSPALFRLPMTGKISSIKLEHVSGYISCSIRKEKSYWACGCC
YHSTSVLTLITDAKDNPQFPVQNYETRVGHKEFTVPGFNQMSNFLVLPAP
KEDPLYYGRKDEVLKVWFGEDFVSWATTDNSGEHCVHVWVNYQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033865XLOC_033865Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053697TCONS_00053697Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01705TSP1REPEATcoord: 154..165
score: 43.68
coord: 173..184
score: 34.3
coord: 136..149
score: 42.22
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 138..190
e-value: 6.6E-12
score: 55.6
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 134..189
e-value: 1.3E-14
score: 53.7
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 140..189
e-value: 9.3E-9
score: 35.3
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 135..190
score: 12.014
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 133..189

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053697-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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