TCONS_00053707-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00053707-protein
Unique Name	TCONS_00053707-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	922

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00053707-protein ID=TCONS_00053707-protein|Name=TCONS_00053707-protein|organism=Clytia hemisphaerica|type=polypeptide|length=922bp
QQRHCSWILTKVRRFFFNLIIMISYVLVVFGLAVVTGVPTTTVNHEVSTT
TVITSTITNRTTSIQTITSSDNQPNEIISSSGDLVVFNNSTYFFGTSHKN
WHNAEKDCVSRGGHLTSIHSHEENEFLLNEAITRNIGFYWVGGERKGNEF
FWSDGTERDYHFWPKTEPNNLCGVENCAEIRLRRMGNDARCNEKRSYVCK
INKTNMKALSIVNIATVTKATSDNTVTLTTTSTTVSTQIYPESFFSESSG
IQNKVTYYFGKSRKNWHDAEKDCVSRGGHLTSIHSHEENEFLKKELKSRG
YLSYVWIGGGQQKDNAWSWTNNSTKNFSLVNTCQKPIPSNKCFSMYHVSF
HWERIPCATAVSFYICKLDVSNWAQLPQMITTNPTTEPLSTISTIQTSLS
PNDNATTTNKPLTNGTENATTTIKPLTNATDNGTTTIEPSTNATDNATTT
IKPSTNATDNATTTIKPLTNGTDNATTTIEPSTNATIEPSTNATDNATTT
IKLSTNATDNGTTTIKPSTNATEDATTTIKPSTNATDNATTTIKPLTNGT
ENATTTIKPSTNATDNATTTIEPSTNTTDNATTTIKPLTNPTDNATTTIE
PSTNATYNTTTTIKPLTNATDNATTTIEPSTNATDNATTTMKPATNATDN
ATTTIEPSTNTTDNATTTIEPSTNATDNATTTIKPLTSATDNATATIEPS
TNATYNTTTTIKSLTNATDNATTTIEPSTNATDNATTKMKPATNATENAT
TTNKPLTNGTENATTTIKPLTNATDNATTTIKPSTNATENATTTNKPLTN
GTENATTTIKPLTNATDNATTTIKPSTNATDNATTTIEPATNATENATTT
NKPLTNGTENATTTIKPLTNATDNATTTIKPSTNTTDNATTTMKPATNAT
ENATTTNKPLTNGTENATTTNK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_033872	XLOC_033872	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00053707	TCONS_00053707	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001304	C-type_lectin-like
IPR016186	C-type_lectin-like/link
IPR016187	CTDL_fold

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001304	C-type lectin-like	SMART	SM00034	CLECT_2	coord: 246..367 e-value: 3.7E-15 score: 66.4 coord: 80..200 e-value: 3.4E-26 score: 103.0
IPR001304	C-type lectin-like	PFAM	PF00059	Lectin_C	coord: 98..200 e-value: 2.5E-16 score: 60.2 coord: 263..367 e-value: 1.4E-14 score: 54.7
IPR001304	C-type lectin-like	PROSITE	PS50041	C_TYPE_LECTIN_2	coord: 252..357 score: 16.832
IPR001304	C-type lectin-like	PROSITE	PS50041	C_TYPE_LECTIN_2	coord: 87..200 score: 21.3
IPR016186	C-type lectin-like/link domain	GENE3D	3.10.100.10		coord: 38..209 e-value: 1.9E-34 score: 118.4
IPR016186	C-type lectin-like/link domain	GENE3D	3.10.100.10		coord: 213..370 e-value: 6.9E-24 score: 83.9
None	No IPR available	GENE3D	1.20.1480.30		coord: 701..800 e-value: 0.27 score: 11.0 coord: 801..906 e-value: 0.0053 score: 16.5
None	No IPR available	GENE3D	1.20.120.570		coord: 382..572 e-value: 0.19 score: 10.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 559..609
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 508..539
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 721..806
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 622..680
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 396..446
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 841..922
None	No IPR available	CDD	cd00037	CLECT	coord: 257..367 e-value: 7.7455E-22 score: 91.5273
None	No IPR available	CDD	cd00037	CLECT	coord: 90..201 e-value: 4.19664E-29 score: 112.713
IPR016187	C-type lectin fold	SUPERFAMILY	56436	C-type lectin-like	coord: 253..371
IPR016187	C-type lectin fold	SUPERFAMILY	56436	C-type lectin-like	coord: 83..203

Blast

[Close]

BLAST of TCONS_00053707-protein vs. Swiss-Prot (Human)
Match: ZAN (Zonadhesin OS=Homo sapiens GN=ZAN PE=2 SV=4)

HSP 1 Score: 83.5741 bits (205), Expect = 4.342e-16
Identity = 118/488 (24.18%), Postives = 193/488 (39.55%), Query Frame = 0

Query:  384 PTTEPLSTISTIQTSLSPNDNATTTNKPLTNGTENATTTIKPL------TNATDNGTTTIEPSTNATDNATTTIKPSTNATDNATTTIKPLTNGTDNATTTIEPSTNATIEPSTNATDNATTTIKLSTNATDNGTTTIKPSTNATEDATTTIKPSTNATDNATTTIKPLTNGTENATTTIKPSTNATDNATTTIEPSTNTTDNATTTIKPLTNPTDNATTTIEPSTNATYNTTTTIKPLTNATDNATTTIEPST--------NATDNATTTMKPA-------------TNATDNATTTIEPSTNTTDNATTTIEPSTNATDNATTTIKPLTSATDNATATIEPSTNATYNTTTTIKSLTNATDNATTTIEPSTNATDNATTKMKPATNATENATTTNKPLTNGTENATTTIKPLTNATDNATTTIKPSTNATENATTTNKPLTNGTENATTTIKPLTNATDNATTTIKPSTNATDNATTTIEPATNAT 844
            P   P+S+    +T+    +   +T KP  +  + + TT KP       T  T+  T + E  T  ++      +  T  ++  T   +  T  ++  T   E  T +T +P+    +  T T + +T+  +    T KPS    + +  T KP+ +  +   +T KP  +  +    T KP+     +  +  +P+T T      T KP  +P    T T +P+ +    T  T KP T  T+  T   E  T           +   +T KP+             T + +  T + E  T   +  T + E  T  T+  T + + LT  T+  T   E  T     TT + + LT  T+  T + E  T +T+  T   +  T  TE  T + + LT  TE  T + + LT  T+  T + +  T  TE  T   +  T  TE  T   + LT     A     PS  AT  A   + P   +T
Sbjct:  543 PPVSPVSSTGPSETTGLTENPTISTKKPTVSIEKPSVTTEKPTVPKEKPTIPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTIPSEKPTISTEKPTVPTEEPTTPTEETTTSMEEPVIPTEKPSIPTEKPSIPTEKPTISMEETIISTEKPTISPEKPTIPTEKPTIPTEKSTISPEKPTTPTEKPTIPTEKPTISPEKPTTPTEKPTISPEKLTIPTEKP-TIPTEKPTIPTEKPTISTEEPTTPTEETTISTEKPSIPMEKPTLPTEETTTSVEETTISTEKLTIPMEKPTISTEKPTIPTEKPTISPEKLTIPTEKLTIPTEKPTIPIEETTISTEKLTIPTEKPTISPEKPTISTEKPTIPTEKPTIPTEETTISTEKLTIPTEKPTISPEKLTIPTEKPTISTEKPTIPTEKLTIPTEKPTIPTEKPTIPTEKLT-----ALRPPHPSPTATGLAALVMSPHAPST 1024

The following BLAST results are available for this feature:

BLAST of TCONS_00053707-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00053707-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ZAN	4.342e-16	24.18	Zonadhesin OS=Homo sapiens GN=ZAN PE=2 SV=4	[more]

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TCONS_00053707-protein (polypeptide) - C. hemisphaerica