TCONS_00054564-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054564-protein
Unique NameTCONS_00054564-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length244

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054564-protein ID=TCONS_00054564-protein|Name=TCONS_00054564-protein|organism=Clytia hemisphaerica|type=polypeptide|length=244bp
MYVPLFISCFLFYVLQKERELEELTERIGQLTTNDGQNRSIVVNRMYQEK
IKCLDQEIAKKNEILKEIKSHIRGCAEREAQLLRDIDELKEKVEFLQNFP
NGVENENDALAALQQSRLRVRTLECEKEELVNELKRLRELTNDGEEKIDV
TQDEIIKKLKNYDKMLALEVDLRTRIKSMEIEKERLSKENNKLKKELDSF
DPAFFDELEDLKYNYQKSLTKNSLLEKQLIDLSEQLGIDVNIPP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034390XLOC_034390Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054564TCONS_00054564Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..99
NoneNo IPR availableCOILSCoilCoilcoord: 113..154
NoneNo IPR availableCOILSCoilCoilcoord: 44..64
NoneNo IPR availableCOILSCoilCoilcoord: 14..34
NoneNo IPR availableCOILSCoilCoilcoord: 169..196
NoneNo IPR availableGENE3D1.20.1170.10coord: 14..237
e-value: 1.1E-4
score: 20.8

Blast
[Close]
BLAST of TCONS_00054564-protein vs. Swiss-Prot (Human)
Match: CE290 (Centrosomal protein of 290 kDa OS=Homo sapiens GN=CEP290 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.468e-28
Identity = 82/218 (37.61%), Postives = 140/218 (64.22%), Query Frame = 0 
Query:   27 RIGQLTTNDGQN-RSIVVNRMYQEKIKCLDQEIAKKNEILKEIKSHIRGCAEREAQLLRDIDELKEKVEFLQNFPNGVENENDALAALQQSRLRVRTLECEKEELVNELKRLRELTNDGEEKIDVTQDEIIKKLKNYDKMLALEVDLRTRIKSMEIEKERLSKENNKLKKELDSFDPAFFDELEDLKYNYQKSLTKNSLLEKQLIDLSEQLGIDVNIP 243
            R  QL   D ++ +SIVV RMY+ K+K L+ +IAKKN+ + ++K  ++   ERE ++ +  ++L+++++ L++ P G E E      LQ  RL    L+ EK EL+++++  ++ +  G E      D++ +K+K          DL T++K  ++EK+ L +E  KLKKEL++FDP+FF+E+EDLKYNY++ + KN LLE+++  LSEQLG+++  P
Sbjct: 2254 RGPQLEGADSKSWKSIVVTRMYETKLKELETDIAKKNQSITDLKQLVKEATEREQKVNKYNEDLEQQIKILKHVPEGAETEQGLKRELQVLRLANHQLDKEKAELIHQIEANKDQS--GAESTIPDADQLKEKIK----------DLETQLKMSDLEKQHLKEEIKKLKKELENFDPSFFEEIEDLKYNYKEEVKKNILLEEKVKKLSEQLGVELTSP 2459
The following BLAST results are available for this feature:
BLAST of TCONS_00054564-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CE2905.468e-2837.61Centrosomal protein of 290 kDa OS=Homo sapiens GN=... [more]
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