TCONS_00054656-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054656-protein
Unique NameTCONS_00054656-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length324

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054656-protein ID=TCONS_00054656-protein|Name=TCONS_00054656-protein|organism=Clytia hemisphaerica|type=polypeptide|length=324bp
MFRLIAALGCLIVVAYACTDRSKNCPNWAKSSQNYCQTNGWVKDNCKKSC
GTCPGGNGGSGGNGGSGGSGSNGQCGISKVSQSRVVNGVEAKPGAWPWIV
SLQTSRGFHFCGGSILTPNWILTASHCVERQMGNQRGVVVVVGAHDKTRR
ESTQQRIQSSQIIMHPNYKQGGGLNADVALIRLSSPLKLNDRVVKACMPQ
QGVYPRVGKNCYIAGWGATNHPGTGAPPKLQQAKLPVVGTPHRGCHNNKE
VVCVGLGFGKQSDGKQHPNACRGDSGGPLMCQQSNGSWTVEGVASYVYTY
CKYYTAYAPVNKYLPWIKQYVRDL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034427XLOC_034427Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054656TCONS_00054656Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR003582ShKT_dom
IPR018114TRYPSIN_HIS
IPR033116TRYPSIN_SER
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 268..280
score: 59.88
coord: 173..187
score: 34.92
coord: 112..127
score: 51.14
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 84..317
e-value: 3.1E-66
score: 236.0
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 85..317
e-value: 7.7E-55
score: 186.0
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 85..322
score: 30.808
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 85..319
e-value: 1.25884E-70
score: 220.611
IPR003582ShKT domainSMARTSM00254ShkT_1coord: 17..54
e-value: 3.6E-6
score: 36.5
IPR003582ShKT domainPFAMPF01549ShKcoord: 18..53
e-value: 1.1E-5
score: 25.7
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 18..53
score: 12.512
NoneNo IPR availableGENE3D2.40.10.10coord: 194..323
e-value: 2.1E-25
score: 89.0
NoneNo IPR availableGENE3D2.40.10.10coord: 117..193
e-value: 3.3E-26
score: 90.7
NoneNo IPR availableGENE3D2.40.10.10coord: 84..95
e-value: 1.6E-4
score: 20.9
NoneNo IPR availableGENE3D2.40.10.10coord: 96..116
e-value: 3.0E-20
score: 71.6
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 5.0
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 122..127
IPR033116Serine proteases, trypsin family, serine active sitePROSITEPS00135TRYPSIN_SERcoord: 269..280
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 73..322

Blast
[Close]
BLAST of TCONS_00054656-protein vs. Swiss-Prot (Human)
Match: CTRB2 (Chymotrypsinogen B2 OS=Homo sapiens GN=CTRB2 PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.035e-45
Identity = 87/259 (33.59%), Postives = 138/259 (53.28%), Query Frame = 0 
Query:   70 GSNGQCGISKVS-----QSRVVNGVEAKPGAWPWIVSLQTSRGFHFCGGSILTPNWILTASHCVERQMGNQRGVVVVVGAHDKTRRESTQQRIQSSQIIMHPNYKQGGGLNADVALIRLSSPLKLNDRVVKACMPQQGVYPRVGKNCYIAGWGATNHPGTGAPPKLQQAKLPVVGTPHRGCHNNKEVVCVGLGFGKQSDGKQHPNACRGDSGGPLMCQQSNGSWTVEGVASYVYTYCKYYT--AYAPVNKYLPWIKQYV 321
            G+   CG+  +       SR+VNG +A PG+WPW VSLQ   GFHFCGGS+++ +W++TA+HC     G +   VVV G  D+   E   Q ++ +++  +P +     +N D+ L++L++P + +  V   C+P        G  C   GWG T +     P KLQQA LP++          + +  V +       G    ++C GDSGGPL+CQ+ +G+WT+ G+ S+    C   T   YA V K +PW+++ +
Sbjct:   14 GTTFGCGVPAIHPVLSGLSRIVNGEDAVPGSWPWQVSLQDKTGFHFCGGSLISEDWVVTAAHC-----GVRTSDVVVAGEFDQGSDEENIQVLKIAKVFKNPKFSI-LTVNNDITLLKLATPARFSQTVSAVCLPSADDDFPAGTLCATTGWGKTKYNANKTPDKLQQAALPLLSNAECKKSWGRRITDVMI-----CAGASGVSSCMGDSGGPLVCQK-DGAWTLVGIVSWGSRTCSTTTPAVYARVAKLIPWVQKIL 260
The following BLAST results are available for this feature:
BLAST of TCONS_00054656-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTRB21.035e-4533.59Chymotrypsinogen B2 OS=Homo sapiens GN=CTRB2 PE=2 ... [more]
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