TCONS_00054803-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054803-protein
Unique NameTCONS_00054803-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1171

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054803-protein ID=TCONS_00054803-protein|Name=TCONS_00054803-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1171bp
MTKTDIPEMASIMGSDGRRPSLKTKRVSWLLDQPMNVKFDEEIKNEDESM
TSSSKHGADQFEILSFIENGNGSKIYDVIQKQRNRKYTMEVVPRKNSTQD
ESKNTKLHKHSQLKAPSCYLTQLKYSFQTKTRKYFILSHLHRQRNLSELF
QKQKILDNNTARFIIIQLLSAIDHLHQSNVCYENINLSDVYFDNKGHVIL
KRTYSGQNYWTVNECYGCHKGKCKNKYHIAGQVASMAKANDFNNVGQLFV
HLITGSQHSYSLLESADRTTKDFAYLLLRHDVDISKIKNHPFVNDINWNG
VTNKELDIPESISMFVKETRERQSSQNSMIIERKDAGSPPEILVGVRKPR
SKSEEPSRVLKASSKKSGVRSKSYSSNEQKLNQNFPNVHRSKSFSKSESY
NSVFQDDVELGTPAKSRRTSIDMYRKRLEEISKVIDTHSNETKQTTPSTN
EIEVAKPRESEFFFEKMYSENEALRTILTKYGLLKDKGPEVRKPQRPNFL
DVKKDDASMTSSGADSPVESNNLLSSKRRQSRKIRKNNLLSRSCNNIQIL
FNENSDHTDSVDENSKRSQLDSSMGKKQKSESCLTVIGTTDEDIDKNNKG
GNKLIDRLNGLSKSKTFYMKRTSSMTSPSSPSVMKRHFSDSHIKSTNLLS
PNPKYQDKMISAPQALSSLLKSTSLIGQKQTSHDSGLNVDLDERDDIGSR
KRGPKIERHDSGLGGSQDRDIVRVWRPGKPDSSLIEQERARGIECYDCGS
EIIEPFSNSIDDLCKACGKSRIERKEAVIELIETEINYGEDLKILKEEFY
TPLKVNHICTPDEISKLFLNLQELVDVNAKLCASLQHGLEECIENDDLNY
ISLAIGDVFLNNVEFFEAYEWYCVKQNESVELLKSLTKKSDLLRVFLQVS
AQENVKLRKMDLKSFLTMPIQRIMKYPLLLSRIYKHTPKKNTDFKPLKNA
IAKVEEKISTINALSKNLNTPKIKKASSLKTMMDIVSSNKSDLTKMVANL
KEWKLEETTIISHEDFEIIETDLVNLTSWSKESFKKISYQQAVIGVNNAP
ENYLQNLQERLENEKAPYRVSEIKDAVIVFFKQKTHDKCQVHKVPLQVKD
CVVAINLNIKIAFEVTEIGRQPLTFVARNTNITREWRRTLQFVIDSLKVK
WRQRRGGRPNIMTEKLHHEDS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034524XLOC_034524Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054803TCONS_00054803Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR000219DH-domain
IPR011009Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
GO:0005089Rho guanyl-nucleotide exchange factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO:0035023regulation of Rho protein signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
biological_process GO:0035023 regulation of Rho protein signal transduction
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005089 Rho guanyl-nucleotide exchange factor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 421..441
NoneNo IPR availableCOILSCoilCoilcoord: 947..967
NoneNo IPR availableGENE3D3.30.200.20coord: 33..158
e-value: 2.8E-9
score: 36.3
NoneNo IPR availableGENE3D1.20.900.10coord: 767..986
e-value: 8.7E-47
score: 158.9
NoneNo IPR availableGENE3D1.10.510.10coord: 159..307
e-value: 1.8E-8
score: 33.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 556..582
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 487..537
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 677..718
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 339..384
NoneNo IPR availableCDDcd00160RhoGEFcoord: 774..962
e-value: 3.2162E-39
score: 144.363
IPR000719Protein kinase domainSMARTSM00220serkin_6coord: 61..293
e-value: 2.9E-5
score: -61.1
IPR000719Protein kinase domainPFAMPF00069Pkinasecoord: 64..198
e-value: 1.1E-10
score: 41.2
IPR000719Protein kinase domainPROSITEPS50011PROTEIN_KINASE_DOMcoord: 61..463
score: 9.743
IPR000219Dbl homology (DH) domainSMARTSM00325RhoGEF_3coord: 777..963
e-value: 2.0E-41
score: 153.6
IPR000219Dbl homology (DH) domainPFAMPF00621RhoGEFcoord: 778..962
e-value: 1.2E-38
score: 133.0
IPR000219Dbl homology (DH) domainPROSITEPS50010DH_2coord: 773..964
score: 34.165
IPR000219Dbl homology (DH) domainSUPERFAMILY48065DBL homology domain (DH-domain)coord: 764..966
IPR011009Protein kinase-like domainSUPERFAMILY56112Protein kinase-like (PK-like)coord: 55..313

Blast
[Close]
BLAST of TCONS_00054803-protein vs. Swiss-Prot (Human)
Match: ITSN1 (Intersectin-1 OS=Homo sapiens GN=ITSN1 PE=1 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 1.193e-18
Identity = 57/189 (30.16%), Postives = 102/189 (53.97%), Query Frame = 0 
Query:  774 RKEAVIELIETEINYGEDLKILKEEFYTPLKVNHICTPDEISKLFLNLQELVDVNAKLCASLQHGLEECIENDDLNYISLAIGDVFLNNVEFFEAYEWYCVKQNESVELLKSLTKKSDLLRVFLQVSAQENVKLRKMDLKSFLTMPIQRIMKYPLLLSRIYKHTPKKNTDFKPLKNAIAKVEEKISTIN 962
            R+  + ELI TE NY  DL+++ E F  PL  + + T  E++ +F+N +EL+  N KL  +L+   +   E   +  I    GD+    +   + Y  +C +Q     L++  T ++   + F++  A  + + + M L SF+  P+QR+ +YPL++  I ++TP+ + D   LK+A+ K EE  S +N
Sbjct: 1238 RQGYIHELIVTEENYVNDLQLVTEIFQKPLMESELLTEKEVAMIFVNWKELIMCNIKLLKALRVRKKMSGEKMPVKMI----GDILSAQLPHMQPYIRFCSRQLNGAALIQQKTDEAPDFKEFVKRLAM-DPRCKGMPLSSFILKPMQRVTRYPLIIKNILENTPENHPDHSHLKHALEKAEELCSQVN 1421
The following BLAST results are available for this feature:
BLAST of TCONS_00054803-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ITSN11.193e-1830.16Intersectin-1 OS=Homo sapiens GN=ITSN1 PE=1 SV=3[more]
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