TCONS_00055021-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00055021-protein
Unique Name	TCONS_00055021-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	412

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00055021-protein ID=TCONS_00055021-protein|Name=TCONS_00055021-protein|organism=Clytia hemisphaerica|type=polypeptide|length=412bp
MAPRLLHPGPIFALSIIGFCFLTSIITILSWLPPNNTKNILNGVIFHFWV
LNILKNFFKASFMGPGHIEFKWKPKRKSDEKLLQYCECCEGYKAPRAHHC
KTCKRCVMKMDHHCPWINNCVGHYNHKSFTYFLFFVVVGCSHAAVMMILC
IIDHITSKNGYILLRVYEEAMIRMNHYLIIMLFFGIGLSVGCTLAVSFLL
YYQVKSIVKNRTGIEDWIVEKAISRNKHIGRTFVYPYDLGKKENIKQVVL
WSADYTGDGITWPVVKGCDQYTLTIEQLEQKDLKRDRMVPYHVTKSYSGT
WCPLMLGCRVLYDCPWSDEARLKVNEGDTFFGSRHKKHWIYGERVLDEDS
KEVQEHKLGELRRKKGWVPRVHLQPIDDKDEETSSDDDRRIEQLKKDKER
TKKQGKESKKKR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_034662	XLOC_034662	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00055021	TCONS_00055021	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001594	Palmitoyltrfase_DHHC

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 384..411
None	No IPR available	GENE3D	2.30.30.40		coord: 308..393 e-value: 5.0E-6 score: 25.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 372..412
None	No IPR available	PROSITE	PS50216	DHHC	coord: 84..134 score: 27.168
IPR001594	Palmitoyltransferase, DHHC domain	PFAM	PF01529	DHHC	coord: 82..217 e-value: 3.9E-35 score: 120.8

Blast

[Close]

BLAST of TCONS_00055021-protein vs. Swiss-Prot (Human)
Match: ZDHC6 (Palmitoyltransferase ZDHHC6 OS=Homo sapiens GN=ZDHHC6 PE=1 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 2.524e-103
Identity = 159/401 (39.65%), Postives = 233/401 (58.10%), Query Frame = 0

Query:    4 RLLHPGPIFALSIIGFCFLTSII-TILSWLPPNNTKNILNGVIFHFWVLNILKNFFKASFMGPGHIEFKWKPKRKSDEKLLQYCECCEGYKAPRAHHCKTCKRCVMKMDHHCPWINNCVGHYNHKSFTYFLFFVVVGCSHAAVMMILCIIDHITSKNGYILLRVYEEAMIRMNHYLIIMLF---------FGIGLSVGCTLAVSFLLYYQVKSIVKNRTGIEDWIVEKAISRNKH--IGRTFVYPYDLGKK-ENIKQVVLWSADYTGDGITWPVVKGCDQYTLTIEQLEQKDLKRDRMVPYHVTKSYSGTWCPLMLGCRVLYDCPWSDEARLKVNEGDTFFGSRHKKHWIYGERVLDEDSKEVQEHKLGELRRKKGWVPR--VHLQPIDDKDEETSSDDDR 389
            RL H GPI AL +I  C   ++I ++L + P + T   +N ++   W + IL N+F A F+GPG +   WKP+   D   LQYC+ C+ YKAPR+HHC+ C RCVMKMDHHCPWINNC G+ NH SFT FL    +GC HAA + ++ +   +  +  +    V  +        L I+ F         F +GL++G T+AV  L + Q+K I++N+T IE WI EKA  R ++  +   FV+PYD+G +  N KQV  WS    GDG+ WPV +GC QY+LTIEQL+QK  KR R V Y V + YSG  CPL  G +  +  P ++E R+++ +G+    +R  ++W+YG+++LD+   E        + R +GW PR  V   P D + ++    + +
Sbjct:   18 RLCHWGPIIALGVIAICSTMAMIDSVLWYWPLHTTGGSVNFIMLINWTVMILYNYFNAMFVGPGFVPLGWKPEISQDTMYLQYCKVCQAYKAPRSHHCRKCNRCVMKMDHHCPWINNCCGYQNHASFTLFLLLAPLGCIHAAFIFVMTMYTQLYHRLSFGWNTVKIDMSAARRDPLPIVPFGLAAFATTLFALGLALGTTIAVGMLFFIQMKIILRNKTSIESWIEEKAKDRIQYYQLDEVFVFPYDMGSRWRNFKQVFTWSGVPEGDGLEWPVREGCHQYSLTIEQLKQKADKRVRSVRYKVIEDYSGACCPLNKGIKTFFTSPCTEEPRIQLQKGEFILATRGLRYWLYGDKILDDSFIE-------GVSRIRGWFPRKCVEKCPCDAETDQAPEGEKK 411

The following BLAST results are available for this feature:

BLAST of TCONS_00055021-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00055021-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ZDHC6	2.524e-103	39.65	Palmitoyltransferase ZDHHC6 OS=Homo sapiens GN=ZDH...	[more]

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TCONS_00055021-protein (polypeptide) - C. hemisphaerica