Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00055273-protein ID=TCONS_00055273-protein|Name=TCONS_00055273-protein|organism=Clytia hemisphaerica|type=polypeptide|length=348bp MLCRRHGRPSTLVLITILQMAALVFFFGITTHLHSNVDSSVKTNIQQVRN ELSYRFHQKIESVKTIVRIDPSLKPRNIKLLNLQDIQPFRGNFLFLVNSN IGNKERRTSIRKHWANQTKFNQHRKKFHNVSFKAYFMTGFKAEKFDLAKT ESVKYGDLLITNRTEDYWDFSRRAMISFYWTIENCNYDYLLKADDDIFIH IPNLFTFLYKDPYVLKHHDRLYAGYIIMHGKPHRNLKFKWGVTYEEWGAD AYPPFSTGMGFILSRFIIEKMIPHFDWEKPFRVDDVYIGHLVYMAQISNI GIRNSVGQEFSRFNDPKKCPIQSKAIVYHQVLTEDCMRKLTESSLKVK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR002659 Glyco_trans_31
Vocabulary: Cellular Component
Term Definition
GO:0016020 membrane
Vocabulary: Molecular Function
Term Definition
GO:0008378 galactosyltransferase activity
Vocabulary: Biological Process
Term Definition
GO:0006486 protein glycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0006486
protein glycosylation
cellular_component
GO:0016020
membrane
molecular_function
GO:0008378
galactosyltransferase activity
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 300 Expect = 2.1E-32 / Score = 112.5 Sequence PF01762
IPR Term IPR Description Source Source Term Source Description Alignment
IPR002659 Glycosyl transferase, family 31 PFAM PF01762 Galactosyl_T coord: 105..299 e-value: 2.1E-32 score: 112.5
Blast
BLAST of TCONS_00055273-protein vs. Swiss-Prot (Human)
Match:
B3GN4 (N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4 OS=Homo sapiens GN=B3GNT4 PE=1 SV=1)
HSP 1 Score: 97.4413 bits (241), Expect = 8.841e-23
Identity = 59/212 (27.83%), Postives = 104/212 (49.06%), Query Frame = 0
Query: 93 FLFLVNSNIGNKERRTSIRKHWANQTKFNQHRKKFHNVSFKAYFMTGF--KAEKFDLAKTESVKYGDLLITNRTEDYWDFSRRAMISFYWTIENC-NYDYLLKADDDIFIHIPNLFTFLYK-DPYVLKHHDRLYAGYIIMHGKPHRNLKFKWGVTYEEWGADAYPPFSTGMGFILSRFIIEKMIPHFDWEKPFRVDDVYIGHLVYMAQISNI 300
L + S G+ ERR +IR W + + R+ K F+ G A L ES ++ D+L + TED+++ + + + W + C ++LK DDD+F+H+PN+ FL DP L G +I P+RN K K+ + + A YPP++ G G+++SR + ++ + + F +DDV++G + +S +
Sbjct: 120 LLLAIKSQPGHVERRAAIRSTWGRVGGWARGRQ------LKLVFLLGVAGSAPPAQLLAYESREFDDILQWDFTEDFFNLTLKELHLQRWVVAACPQAHFMLKGDDDVFVHVPNVLEFLDGWDPA-----QDLLVGDVIRQALPNRNTKVKYFIPPSMYRATHYPPYAGGGGYVMSRATVRRLQAIMEDAELFPIDDVFVGMCLRRLGLSPM 320
The following BLAST results are available for this feature:
BLAST of TCONS_00055273-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M L C R R H G R P S T L V L I T I L Q M A A L V F F F G I T T H L H S N V D S S V K T N I Q Q V R N E L S Y R F H Q K I E S V K T I V R I D P S L K P R N I K L L N L Q D I Q P F R G N F L F L V N S N I G N K E R R T S I R K H W A N Q T K F N Q H R K K F H N V S F K A Y F M T G F K A E K F D L A K T E S V K Y G D L L I T N R T E D Y W D F S R R A M I S F Y W T I E N C N Y D Y L L K A D D D I F I H I P N L F T F L Y K D P Y V L K H H D R L Y A G Y I I M H G K P H R N L K F K W G V T Y E E W G A D A Y P P F S T G M G F I L S R F I I E K M I P H F D W E K P F R V D D V Y I G H L V Y M A Q I S N I G I R N S V G Q E F S R F N D P K K C P I Q S K A I V Y H Q V L T E D C M R K L T E S S L K V K 50 100 150 200 250 300 Expect = 8.84e-23 / Id = 27.83 Sequence B3GN4
Match Name E-value Identity Description
B3GN4 8.841e-23 27.83 N-acetyllactosaminide beta-1,3-N-acetylglucosaminy... [more]
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