TCONS_00055273-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055273-protein
Unique NameTCONS_00055273-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length348

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055273-protein ID=TCONS_00055273-protein|Name=TCONS_00055273-protein|organism=Clytia hemisphaerica|type=polypeptide|length=348bp
MLCRRHGRPSTLVLITILQMAALVFFFGITTHLHSNVDSSVKTNIQQVRN
ELSYRFHQKIESVKTIVRIDPSLKPRNIKLLNLQDIQPFRGNFLFLVNSN
IGNKERRTSIRKHWANQTKFNQHRKKFHNVSFKAYFMTGFKAEKFDLAKT
ESVKYGDLLITNRTEDYWDFSRRAMISFYWTIENCNYDYLLKADDDIFIH
IPNLFTFLYKDPYVLKHHDRLYAGYIIMHGKPHRNLKFKWGVTYEEWGAD
AYPPFSTGMGFILSRFIIEKMIPHFDWEKPFRVDDVYIGHLVYMAQISNI
GIRNSVGQEFSRFNDPKKCPIQSKAIVYHQVLTEDCMRKLTESSLKVK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034816XLOC_034816Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055273TCONS_00055273Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002659Glyco_trans_31
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0008378galactosyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
cellular_component GO:0016020 membrane
molecular_function GO:0008378 galactosyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300Expect = 2.1E-32 / Score = 112.5SequencePF01762
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002659Glycosyl transferase, family 31PFAMPF01762Galactosyl_Tcoord: 105..299
e-value: 2.1E-32
score: 112.5

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055273-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
MLCRRHGRPSTLVLITILQMAALVFFFGITTHLHSNVDSSVKTNIQQVRNELSYRFHQKIESVKTIVRIDPSLKPRNIKLLNLQDIQPFRGNFLFLVNSNIGNKERRTSIRKHWANQTKFNQHRKKFHNVSFKAYFMTGFKAEKFDLAKTESVKYGDLLITNRTEDYWDFSRRAMISFYWTIENCNYDYLLKADDDIFIHIPNLFTFLYKDPYVLKHHDRLYAGYIIMHGKPHRNLKFKWGVTYEEWGADAYPPFSTGMGFILSRFIIEKMIPHFDWEKPFRVDDVYIGHLVYMAQISNIGIRNSVGQEFSRFNDPKKCPIQSKAIVYHQVLTEDCMRKLTESSLKVK50100150200250300Expect = 8.84e-23 / Id = 27.83SequenceB3GN4
Match NameE-valueIdentityDescription
B3GN48.841e-2327.83N-acetyllactosaminide beta-1,3-N-acetylglucosaminy... [more]
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