TCONS_00055358-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055358-protein
Unique NameTCONS_00055358-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length262

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055358-protein ID=TCONS_00055358-protein|Name=TCONS_00055358-protein|organism=Clytia hemisphaerica|type=polypeptide|length=262bp
MPHDIDGAGPAAPLKSALRRQSKYDEELSIEELQFEEADLSDLTGSDTGE
VGENGRGGGGFVDWDDENDPDFIEVNTSNTYVDEDGGDGEDDGKGLASKV
KRSDSLALKLGARPSRSELEGKNIIPTQSDDEKLALRSKVGTNLVRRLSQ
RPSKEELEQRNIYRTTTDEETHQKNLEETKRQLSRKLSRRPTIKELRKKK
IIGFNEYVEVFEVQEYDRRADKPWTRLTPKDKASIRKELNEYKEYEMDVH
EESKIYTRFHRP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034874XLOC_034874Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055358TCONS_00055358Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004018RPEL_repeat
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004018RPEL repeatSMARTSM00707rpelcoord: 142..167
e-value: 2.1E-5
score: 34.0
coord: 181..206
e-value: 7.5E-5
score: 32.1
coord: 104..129
e-value: 1.6E-5
score: 34.3
IPR004018RPEL repeatPFAMPF02755RPELcoord: 143..162
e-value: 1.8E-6
score: 27.4
IPR004018RPEL repeatPROSITEPS51073RPELcoord: 142..167
score: 9.522
IPR004018RPEL repeatPROSITEPS51073RPELcoord: 104..129
score: 9.741
IPR004018RPEL repeatPROSITEPS51073RPELcoord: 181..206
score: 8.497
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

Blast
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BLAST of TCONS_00055358-protein vs. Swiss-Prot (Human)
Match: PHAR2 (Phosphatase and actin regulator 2 OS=Homo sapiens GN=PHACTR2 PE=1 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 5.649e-62
Identity = 103/168 (61.31%), Postives = 133/168 (79.17%), Query Frame = 0 
Query:   95 GLASKVKRSDSLALKLGARPSRSELEGKNIIPTQSDDEKLALRSKVGTNLVRRLSQRPSKEELEQRNIYRTTTDEETHQKNLEETKRQLSRKLSRRPTIKELRKKKIIGFNEYVEVFEVQEYDRRADKPWTRLTPKDKASIRKELNEYKEYEMDVHEESKIYTRFHRP 262
             LASK++R D+LA+KLG RPS+ ELE KNI+   S++E+  +R ++GT LVRRLSQRP+ EELEQRNI +   +EE  +  +E  KR+LSRKLS RPT+ EL+ ++I+ FNEYVEV +  +YDRRADKPW RLTP DKA+IRKELNE+K  EM+VHEES+ +TRFHRP
Sbjct:  468 ALASKIRRRDTLAIKLGNRPSKKELEDKNILQRTSEEERQEIRQQIGTKLVRRLSQRPTTEELEQRNILKQKNEEEEQEAKME-LKRRLSRKLSLRPTVAELQARRILRFNEYVEVTDSPDYDRRADKPWARLTPADKAAIRKELNEFKSTEMEVHEESRQFTRFHRP 634
The following BLAST results are available for this feature:
BLAST of TCONS_00055358-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PHAR25.649e-6261.31Phosphatase and actin regulator 2 OS=Homo sapiens ... [more]
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