TCONS_00056105-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00056105-protein
Unique Name	TCONS_00056105-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	496

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00056105-protein ID=TCONS_00056105-protein|Name=TCONS_00056105-protein|organism=Clytia hemisphaerica|type=polypeptide|length=496bp
MLLVISFIACTISTIQSYPTKQSHVPYFHKERPKGGFLGDPYIDPRKNFK
AAEPQWYTQQLNHFDDQDTRTWQQKYYVNATQFGENGPVFLMIGGEGPLS
ARWVGVGSMVEMAKEHKALVLALEHRYYGDSHPTSDTSVENLKYLSSEQA
LADLATFRASMVEQFALSDKNKWISFGGSYPGALSAWFRYKYPHLVHGAV
ASSAPINAQTDFPEYLEVSTDSLGTQECKDSVQAATTSVEKYVQTEAGRK
MLTDLFHLCEPLSDDPNDISQFTSSMAGNFFGVIQYNKDNRAFEGATGTN
ITVDTLCNIMSLPIFGDEMHRYAKINEIMMETYKQTCISPNYKKFIEEMK
VTDWKSVEGGRQWTYQTCTEFGYYQSSDSKSQVYGTTFPLSFWTKQCVDI
FGANFNETSINRAVDWTNDNYGGYNMNQPRIVFPNGSIDPWHALSFTDDH
KDMIAVFIKGTAHCANMYPSSEDDSQELQDARQKIHDLVGKWLQEE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_035307	XLOC_035307	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00056105	TCONS_00056105	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008758	Peptidase_S28
IPR029058	AB_hydrolase

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Molecular Function**
Term	Definition
GO:0008236	serine-type peptidase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008236	serine-type peptidase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008758	Peptidase S28	PFAM	PF05577	Peptidase_S28	coord: 59..485 e-value: 1.3E-144 score: 482.2
IPR029058	Alpha/Beta hydrolase fold	GENE3D	3.40.50.1820		coord: 53..495 e-value: 6.4E-25 score: 88.2
IPR029058	Alpha/Beta hydrolase fold	SUPERFAMILY	53474	alpha/beta-Hydrolases	coord: 55..214

Blast

[Close]

BLAST of TCONS_00056105-protein vs. Swiss-Prot (Human)
Match: TSSP (Thymus-specific serine protease OS=Homo sapiens GN=PRSS16 PE=2 SV=2)

HSP 1 Score: 259.61 bits (662), Expect = 1.527e-80
Identity = 158/465 (33.98%), Postives = 242/465 (52.04%), Query Frame = 0

Query:   51 AAEPQ--WYTQQLNHFDDQDTRTWQQKYYVNATQF-GENGPVFLMIGGEGPLSARWVGVGSMVEMAKEHKALVLALEHRYYGDSHPTSDTSVENLKYLSSEQALADLATFRASMVEQFALSDKNKWISFGGSYPGALSAWFRYKYPHLVHGAVASSAPINAQTDFPEYLEVSTDSL------GTQECKDSVQAATTSVEKYVQT-EAGRKMLTDLFHLCEPLSDDPNDISQFTSSMAGNFFGVIQYNKDNRAFEGATGTNITVDTLCNIM---------SLPIFGDEMHRYAKINEIMMETYKQTCISPNYKKFIEEMKVTDWK-SVEGGRQWTYQTCTEFGYYQSSDSKSQVYGTTFPLSFWTKQCVDIFGANFNETSINRAVDWTNDNYGGYNMNQPRIVFPNGSIDPWHALSFTDD-HKDMIAVFIKGTAHCANMYPSSEDDSQELQDARQKIHDLVGKWLQ 494
            AA P+  W  Q L+ F+  D R++ Q+Y+VN   + G++GP+FL +GGEG L    V  G    +A    ALV++LEHR+YG S P     +  L++LSS  ALAD+ + R ++   F +S  + WI FGGSY G+L+AW R K+PHL+  +VASSAP+ A  DF EY +V + SL      G+ EC+ +V  A   VE+ +++  A +  L      C PL    N  ++   ++     GV+QY+       G TG  ++V  LC ++         S P  G       +  +I++ +  Q C+S +  + + +++ T+ + S  G RQW YQTCTEFG+Y + ++    +     L      C  +FG   +  S+ +AV  TN  YGG      +++F NG  DPWH LS T         + I+  +HC +M P    DS  L+  RQ I   +  WL+
Sbjct:   54 AALPKVGWLEQLLDPFNVSDRRSFLQRYWVNDQHWVGQDGPIFLHLGGEGSLGPGSVMRGHPAALAPAWGALVISLEHRFYGLSIPAGGLEMAQLRFLSSRLALADVVSARLALSRLFNISSSSPWICFGGSYAGSLAAWARLKFPHLIFASVASSAPVRAVLDFSEYNDVVSRSLMSTAIGGSLECRAAVSVAFAEVERRLRSGGAAQAALRTELSACGPLGRAENQ-AELLGALQALVGGVVQYD-------GQTGAPLSVRQLCGLLLGGGGNRSHSTPYCG-----LRRAVQIVLHSLGQKCLSFSRAETVAQLRSTEPQLSGVGDRQWLYQTCTEFGFYVTCENPRCPFSQLPALPSQLDLCEQVFG--LSALSVAQAVAQTNSYYGGQTPGANKVLFVNGDTDPWHVLSVTQALGSSESTLLIRTGSHCLDMAPERPSDSPSLRLGRQNIFQQLQTWLK 503

The following BLAST results are available for this feature:

BLAST of TCONS_00056105-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00056105-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TSSP	1.527e-80	33.98	Thymus-specific serine protease OS=Homo sapiens GN...	[more]

You are here

TCONS_00056105-protein (polypeptide) - C. hemisphaerica