TCONS_00056300-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056300-protein
Unique NameTCONS_00056300-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length551

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056300-protein ID=TCONS_00056300-protein|Name=TCONS_00056300-protein|organism=Clytia hemisphaerica|type=polypeptide|length=551bp
MAIITEEITETQLIHGNGTALPEKRNGYHKIANGRNGFNNNREQKPAQRD
KPKKQQLFEETPLIVAVITYIGYGVLVVFGYFRDFLRLYKFEKTKAAKEK
GRMGFVPLYADFESFYTRNLYTRIRDCWNRPICSVAGAEVTLLDRDSEDY
NWNFSITGKTTRVINMGSYNYLGFGECTGPCTDAAEDTITGCGVGSASTR
SETGMHEKQEELENIVARFVRKEAAVCFGMGFATNSTCIPSIIGPGCCII
SDELNHASLVLGTRLSGAKVYVFKHNDMEDLERILRTCIVQGQPRTHRPW
KRMIIVVEGIYSMEGSIVKLPEIIELKKKYKAYLYLDEAHSIGALGPNGR
GVVDYFGLDTTDIDIMMGTFTKSFGASGGYIAAEKHLVDHIRASSYSSAY
AATMAPTVMQQVISSMKIIMGEDGTNEGARRLKQLKDNIIMFRQKLEDKG
FIIYGHEASPVIPLLLYMPAKIAAFSREMLKRGVGVVVVGFPATPIIESR
SRFCLSAAHTPEMLNEVLDALDDVGNILQLKYSRLSPEQPIEPQQEKAKD
E
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035467XLOC_035467Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056300TCONS_00056300Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015422PyrdxlP-dep_Trfase_sub2
IPR004839Aminotransferase_I/II
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR001917Aminotrans_II_pyridoxalP_BS
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0030170pyridoxal phosphate binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0008152metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009058 biosynthetic process
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0016740 transferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 549..551
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..54
NoneNo IPR availableCDDcd06454KBL_likecoord: 162..525
e-value: 1.39878E-144
score: 422.74
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2GENE3D3.90.1150.10coord: 420..533
e-value: 2.2E-25
score: 88.6
IPR004839Aminotransferase, class I/classIIPFAMPF00155Aminotran_1_2coord: 162..521
e-value: 2.8E-57
score: 194.5
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1GENE3D3.40.640.10coord: 94..419
e-value: 7.0E-56
score: 188.9
IPR001917Aminotransferase, class-II, pyridoxal-phosphate binding sitePROSITEPS00599AA_TRANSFER_CLASS_2coord: 369..378
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 109..525

Blast
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BLAST of TCONS_00056300-protein vs. Swiss-Prot (Human)
Match: SPTC2 (Serine palmitoyltransferase 2 OS=Homo sapiens GN=SPTLC2 PE=1 SV=1)

HSP 1 Score: 662.914 bits (1709), Expect = 0.000e+0
Identity = 311/482 (64.52%), Postives = 387/482 (80.29%), Query Frame = 0 
Query:   55 QQLFEETPLIVAVITYIGYGVLVVFGYFRDFLRLYKFEKTKAAKEKG-RMGFVPLYADFESFYTRNLYTRIRDCWNRPICSVAGAEVTLLDRDSEDYNWNFSITGKTTR-VINMGSYNYLGFGECTGPCTDAAEDTITGCGVGSASTRSETGMHEKQEELENIVARFVRKEAAVCFGMGFATNSTCIPSIIGPGCCIISDELNHASLVLGTRLSGAKVYVFKHNDMEDLERILRTCIVQGQPRTHRPWKRMIIVVEGIYSMEGSIVKLPEIIELKKKYKAYLYLDEAHSIGALGPNGRGVVDYFGLDTTDIDIMMGTFTKSFGASGGYIAAEKHLVDHIRASSYSSAYAATMAPTVMQQVISSMKIIMGEDGTNEGARRLKQLKDNIIMFRQKLEDKGFIIYGHEASPVIPLLLYMPAKIAAFSREMLKRGVGVVVVGFPATPIIESRSRFCLSAAHTPEMLNEVLDALDDVGNILQLKYSR 534
             + FEETP++VAV+TY+GYGVL +FGY RDFLR ++ EK   A E+  +  FV LY DFE+FYTRNLY RIRD WNRPICSV GA V +++R S DYNW+F  TG   + VINMGSYNYLGF   TG C +AA   +   G G  STR E G  +K EELE +VARF+  EAA+ +GMGFATNS  IP+++G GC I+SDELNHASLVLG RLSGA + +FKHN+M+ LE++L+  IV GQPRT RPWK+++I+VEGIYSMEGSIV+LPE+I LKKKYKAYLYLDEAHSIGALGP GRGVV+YFGLD  D+D+MMGTFTKSFGASGGYI  +K L+D++R  S+S+ YA +++P V++Q+I+SMK IMG+DGT+ G   ++QL +N   FR++L++ GFIIYG+E SPV+PL+LYMPAKI AF REMLKR +GVVVVGFPATPIIESR+RFCLSAAHT E+L+  L  +D+VG++LQLKYSR
Sbjct:   60 NEAFEETPMLVAVLTYVGYGVLTLFGYLRDFLRYWRIEKCHHATEREEQKDFVSLYQDFENFYTRNLYMRIRDNWNRPICSVPGARVDIMERQSHDYNWSFKYTGNIIKGVINMGSYNYLGFARNTGSCQEAAAKVLEEYGAGVCSTRQEIGNLDKHEELEELVARFLGVEAAMAYGMGFATNSMNIPALVGKGCLILSDELNHASLVLGARLSGATIRIFKHNNMQSLEKLLKDAIVYGQPRTRRPWKKILILVEGIYSMEGSIVRLPEVIALKKKYKAYLYLDEAHSIGALGPTGRGVVEYFGLDPEDVDVMMGTFTKSFGASGGYIGGKKELIDYLRTHSHSAVYATSLSPPVVEQIITSMKCIMGQDGTSLGKECVQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLYMPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDLLQLKYSR 541
The following BLAST results are available for this feature:
BLAST of TCONS_00056300-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SPTC20.000e+064.52Serine palmitoyltransferase 2 OS=Homo sapiens GN=S... [more]
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