TCONS_00056303-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056303-protein
Unique NameTCONS_00056303-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length476

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056303-protein ID=TCONS_00056303-protein|Name=TCONS_00056303-protein|organism=Clytia hemisphaerica|type=polypeptide|length=476bp
MHRADKKRVTFKRRGETVGSLPESIIDDQWSTRCTTSDWDYLFPNGSIGY
SCSFCPTNPNIFNVCFGQAGNAQIHDEELVNQPIVKNIGIAFSVFYKYSG
EDDDNNGDNVESGEINGGGNPNDSDDGDNESDGSDELINSSWYFTYSSLP
PPTFSKCGKYFTTILNNGSNGVRVLKILDGENLEDDKLVDLVAIACKGGN
EIVTGRCKMFAIHDNYAATVVDIDSSHNYMITIWRFGYNSKNEPHIRFYW
SKKIRELFTLDNNYVESFFINHEFTASGKYITFLLANGFYFTLDIEAKDC
IYSGHLPTILDNPNAVQNITNITHYVFTNQMHFIFGFLNECLSINPASNN
IESLIKLPKDQIITHVRFSNTKELLSLCTGPEGNVFIYTFTNKHQFDQLY
KINNFGSTSVARYCDFSWTSEELIVSYQNGDYRVWQFPRRLKLKEIARIQ
ILKLVADSDIEQLLLPKSLKEYLFFR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035468XLOC_035468Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056303TCONS_00056303Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001496SOCS_box
IPR015943WD40/YVTN_repeat-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0035556intracellular signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035556 intracellular signal transduction
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001496SOCS box domainPFAMPF07525SOCS_boxcoord: 442..473
e-value: 1.6E-4
score: 21.9
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 30..442
e-value: 1.6E-7
score: 30.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..133
NoneNo IPR availableSUPERFAMILY101908Putative isomerase YbhEcoord: 154..439

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056303-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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