TCONS_00056327-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056327-protein
Unique NameTCONS_00056327-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1117

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056327-protein ID=TCONS_00056327-protein|Name=TCONS_00056327-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1117bp
MDFLRGGNQRNTEQQRNIDVNRVTVDKSHQQQITVALQNHITGHQKIVDS
TNVNTSNSEPNYISQSRKSSTDSINKNKQYQFVDSERENVEHDELMLHID
DDCILDHQSVEGGGEIKPRPSSSMLEQSGGRDSGISTESSSSKYQELFSK
CSQIEDMIQERVETSQKELQSAKKKLEELRLLRFEEKNILRQEIEQLHEK
VDTEESRTTKLEEELKKSETDRLITSQRVSDLSKEQEIGSQINMMQEQEI
VRLEMKLKEEALERVNLSQQIDQQRRNIIEKDKLRLKLQGEIYILNERIT
QLEESNMYYKNESDINYRKSRENDQALVDLKAELKTLQKKYDNATVELTT
ANLQVKMLESEKSKIEDIAKKNEVEIEDLKKKIDSLTQRSEQSEKYFKNR
EDNLQQDLENVSFNESKLMERCEELETLYHDTRREKDEQHFKLKQVIERA
AALEQRVKEVEDEKTDMEFDLSELKNSLVRSMKHSVTNDQEGNSTTVESN
NNTNTILTPKEIEAFFNENKSKMYKYQHEIDDLSSQLVKERTIVNDLNDT
LDGLKNELSKAQSNMHNISSLKDTLETQQQRTNETLRIQEKDFDRKRQEN
DDLREIISDYERRSALLENEISXQENDDLREIISDYERRSALLENEISQM
NEEIKNLSNSHKEERKKLKARLHEVETQKQIAESSMRKSQNCLEGDKERL
ADDLMRKTRENGELKQELDKLIEDNKNLAKRLLHLESYSDRLSEMLEQQQ
ANNQKLKDKSVKENRLYRNESGEKEVEISTLKNQLDDLNRSLNDKQDMGD
RLGTKLKQVKDSNKDLEKHVKDLDKYNAELKKRLDLVNEAHMTAERKLVT
GEESVLMLKQRVEDQKKVIEDLFIKIKNLEQDKTALKEGLQTSEKRLHLK
EDLITELTKKTGQAAENFNSLRFSLEKAEHDGKQYEKNFFDMKKNQMNLE
KALNESEAERSVLKEQISDLQRLLVRSEDEKEFSMGECARFQRQLENERI
SLKELQEKYEENNKRKEYEILQDQMTLLRSELQTERKQRERLEDLYYKRD
DQVTKLRSTFDQSLNTISKDTKNIKSILGKSLKKLDKEIDGNDVTDDDMT
SSEKNFTVDDYTPQXMI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035482XLOC_035482Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056327TCONS_00056327Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 415..435
NoneNo IPR availableCOILSCoilCoilcoord: 586..622
NoneNo IPR availableCOILSCoilCoilcoord: 320..396
NoneNo IPR availableCOILSCoilCoilcoord: 443..477
NoneNo IPR availableCOILSCoilCoilcoord: 988..1045
NoneNo IPR availableCOILSCoilCoilcoord: 697..731
NoneNo IPR availableCOILSCoilCoilcoord: 862..896
NoneNo IPR availableCOILSCoilCoilcoord: 187..221
NoneNo IPR availableCOILSCoilCoilcoord: 243..277
NoneNo IPR availableCOILSCoilCoilcoord: 739..766
NoneNo IPR availableCOILSCoilCoilcoord: 806..847
NoneNo IPR availableCOILSCoilCoilcoord: 537..571
NoneNo IPR availableCOILSCoilCoilcoord: 771..798
NoneNo IPR availableCOILSCoilCoilcoord: 946..980
NoneNo IPR availableCOILSCoilCoilcoord: 624..685
NoneNo IPR availableCOILSCoilCoilcoord: 155..182
NoneNo IPR availableGENE3D1.20.120.330coord: 770..922
e-value: 3.9E-5
score: 22.8
NoneNo IPR availableGENE3D1.20.5.50coord: 281..394
e-value: 0.14
score: 11.3
NoneNo IPR availableGENE3D1.20.5.340coord: 503..625
e-value: 3.3E-4
score: 19.9
coord: 395..502
e-value: 0.06
score: 12.6
NoneNo IPR availableGENE3D1.20.5.50coord: 626..685
e-value: 0.048
score: 12.9
NoneNo IPR availableGENE3D1.10.287.620coord: 926..1088
e-value: 3.6E-4
score: 19.5
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 745..987
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 311..559

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056327-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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