TCONS_00056335-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056335-protein
Unique NameTCONS_00056335-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length320

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056335-protein ID=TCONS_00056335-protein|Name=TCONS_00056335-protein|organism=Clytia hemisphaerica|type=polypeptide|length=320bp
REQSVQENTNQQVGCLNEAPTLSEIQPSIIKDTLCFTKSVTNHTDLPIRD
HKRDCAIDNTVIKSQVTSYFTKSTSQPSNINCVELQTVSTGEIQNQDLIL
GSDKINLSETVSCTKRKTRPSTESIPEPSIVALSHPQRIVKGEKGFQCHD
CGKYFTRKTSLERHYRVHTGEKPFKCEICGKQYSQKSVLQRHLVTHDVLK
PYQCQLCQKMFSEKTALRRHYETHSQAKPHKCHLCGKAFGLKEYLSKHMF
LHKGLKPYECKVCEKSFADSSAYKRHCLTHDESKVKLLCSSCNKTFKTQR
TLKIHQQKCQQHMLRNLQTT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035488XLOC_035488Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056335TCONS_00056335Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 202..224
e-value: 9.0E-4
score: 28.5
coord: 258..280
e-value: 0.0031
score: 26.7
coord: 230..252
e-value: 0.067
score: 22.3
coord: 287..312
e-value: 6.8
score: 14.8
coord: 146..168
e-value: 3.9E-4
score: 29.7
coord: 174..196
e-value: 4.1E-4
score: 29.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 204..224
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 260..280
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 148..168
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 176..196
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 232..252
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 202..229
score: 14.253
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 174..201
score: 13.277
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 287..312
score: 9.162
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 146..173
score: 18.077
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 230..257
score: 13.547
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 258..285
score: 11.136
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 224..276
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 144..196
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 183..239
NoneNo IPR availableGENE3D3.30.160.60coord: 237..251
e-value: 1.9E-9
score: 36.8
NoneNo IPR availableGENE3D3.30.160.60coord: 252..270
e-value: 1.2E-9
score: 37.6
NoneNo IPR availableGENE3D3.30.160.60coord: 71..151
e-value: 2.0E-6
score: 27.6
coord: 271..316
e-value: 6.0E-11
score: 42.1
NoneNo IPR availableGENE3D3.30.160.60coord: 152..167
e-value: 4.4E-12
score: 45.4
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 258..280
e-value: 0.0011
score: 19.5
coord: 202..224
e-value: 1.8E-4
score: 22.0
NoneNo IPR availableGENE3D3.30.160.60coord: 168..185
e-value: 2.8E-15
score: 55.7
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 146..168
e-value: 3.3E-6
score: 27.1
coord: 174..196
e-value: 1.5E-4
score: 21.9
coord: 230..252
e-value: 0.0091
score: 16.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 202..236
e-value: 4.9E-18
score: 64.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 186..201
e-value: 3.4E-8
score: 33.1

Blast
BLAST of TCONS_00056335-protein vs. Swiss-Prot (Human)
Match: ZN345 (Zinc finger protein 345 OS=Homo sapiens GN=ZNF345 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.860e-42
Identity = 80/179 (44.69%), Postives = 108/179 (60.34%), Query Frame = 0
Query:  129 SIVALSHPQRIVKGEKGFQCHDCGKYFTRKTSLERHYRVHTGEKPFKCEICGKQYSQKSVLQRHLVTHDVLKPYQCQLCQKMFSEKTALRRHYETHSQAKPHKCHLCGKAFGLKEYLSKHMFLHKGLKPYECKVCEKSFADSSAYKRHCLTHDESKVKLLCSSCNKTFKTQRTLKIHQQ 307
            S   L++ QRI  GEK F+C +CGK F   ++L  H R+HTGEKP++C+ CGK +S  S L RH + H   KPY+C+ C K FS ++AL RH+  H+  KP++C  CGKAFG    L++H  +H G KPYECK C  +F+  SA  RH   H   K   +C+ C K F     L  HQ+
Sbjct:  101 SGANLAYHQRIHTGEKPFECKECGKAFGSGSNLTHHQRIHTGEKPYECKECGKAFSFGSGLIRHQIIHSGEKPYECKECGKSFSFESALIRHHRIHTGEKPYECIDCGKAFGSGSNLTQHRRIHTGEKPYECKACGMAFSSGSALTRHQRIHTGEKP-YICNECGKAFSFGSALTRHQR 278          

HSP 2 Score: 139.043 bits (349), Expect = 2.241e-37
Identity = 75/176 (42.61%), Postives = 101/176 (57.39%), Query Frame = 0
Query:  132 ALSHPQRIVKGEKGFQCHDCGKYFTRKTSLERHYRVHTGEKPFKCEICGKQYSQKSVLQRHLVTHDVLKPYQCQLCQKMFSEKTALRRHYETHSQAKPHKCHLCGKAFGLKEYLSKHMFLHKGLKPYECKVCEKSFADSSAYKRHCLTHDESKVKLLCSSCNKTFKTQRTLKIHQQ 307
            AL+  QRI  GEK + C +CGK F   + L +H R+HTGEKP++C+ C K +   S L +H   H   KPY+C+ C K FS  + L +H+  H+  KP++C  CGKAFG    L +H  +H G +PYECK C KSF+  SA  RH   H   K    C  C K F +  +L  HQ+
Sbjct:  272 ALTRHQRIHTGEKPYVCKECGKAFNSGSDLTQHQRIHTGEKPYECKECEKAFRSGSKLIQHQRMHTGEKPYECKECGKTFSSGSDLTQHHRIHTGEKPYECKECGKAFGSGSKLIQHQLIHTGERPYECKECGKSFSSGSALNRHQRIHTGEKP-YECKECGKAFYSGSSLTQHQR 446          

HSP 3 Score: 137.887 bits (346), Expect = 6.252e-37
Identity = 77/176 (43.75%), Postives = 97/176 (55.11%), Query Frame = 0
Query:  132 ALSHPQRIVKGEKGFQCHDCGKYFTRKTSLERHYRVHTGEKPFKCEICGKQYSQKSVLQRHLVTHDVLKPYQCQLCQKMFSEKTALRRHYETHSQAKPHKCHLCGKAFGLKEYLSKHMFLHKGLKPYECKVCEKSFADSSAYKRHCLTHDESKVKLLCSSCNKTFKTQRTLKIHQQ 307
            AL    RI  GEK ++C DCGK F   ++L +H R+HTGEKP++C+ CG  +S  S L RH   H   KPY C  C K FS  +AL RH   H+  KP+ C  CGKAF     L++H  +H G KPYECK CEK+F   S   +H   H   K    C  C KTF +   L  H +
Sbjct:  188 ALIRHHRIHTGEKPYECIDCGKAFGSGSNLTQHRRIHTGEKPYECKACGMAFSSGSALTRHQRIHTGEKPYICNECGKAFSFGSALTRHQRIHTGEKPYVCKECGKAFNSGSDLTQHQRIHTGEKPYECKECEKAFRSGSKLIQHQRMHTGEKP-YECKECGKTFSSGSDLTQHHR 362          

HSP 4 Score: 135.576 bits (340), Expect = 3.959e-36
Identity = 73/179 (40.78%), Postives = 103/179 (57.54%), Query Frame = 0
Query:  129 SIVALSHPQRIVKGEKGFQCHDCGKYFTRKTSLERHYRVHTGEKPFKCEICGKQYSQKSVLQRHLVTHDVLKPYQCQLCQKMFSEKTALRRHYETHSQAKPHKCHLCGKAFGLKEYLSKHMFLHKGLKPYECKVCEKSFADSSAYKRHCLTHDESKVKLLCSSCNKTFKTQRTLKIHQQ 307
            S  AL+  QRI  GEK + C++CGK F+  ++L RH R+HTGEKP+ C+ CGK ++  S L +H   H   KPY+C+ C+K F   + L +H   H+  KP++C  CGK F     L++H  +H G KPYECK C K+F   S   +H L H   +    C  C K+F +   L  HQ+
Sbjct:  241 SGSALTRHQRIHTGEKPYICNECGKAFSFGSALTRHQRIHTGEKPYVCKECGKAFNSGSDLTQHQRIHTGEKPYECKECEKAFRSGSKLIQHQRMHTGEKPYECKECGKTFSSGSDLTQHHRIHTGEKPYECKECGKAFGSGSKLIQHQLIHTGERP-YECKECGKSFSSGSALNRHQR 418          

HSP 5 Score: 134.035 bits (336), Expect = 1.281e-35
Identity = 72/175 (41.14%), Postives = 99/175 (56.57%), Query Frame = 0
Query:  133 LSHPQRIVKGEKGFQCHDCGKYFTRKTSLERHYRVHTGEKPFKCEICGKQYSQKSVLQRHLVTHDVLKPYQCQLCQKMFSEKTALRRHYETHSQAKPHKCHLCGKAFGLKEYLSKHMFLHKGLKPYECKVCEKSFADSSAYKRHCLTHDESKVKLLCSSCNKTFKTQRTLKIHQQ 307
            L+H QRI  GEK ++C +CGK F+  + L RH  +H+GEKP++C+ CGK +S +S L RH   H   KPY+C  C K F   + L +H   H+  KP++C  CG AF     L++H  +H G KPY C  C K+F+  SA  RH   H   K   +C  C K F +   L  HQ+
Sbjct:  133 LTHHQRIHTGEKPYECKECGKAFSFGSGLIRHQIIHSGEKPYECKECGKSFSFESALIRHHRIHTGEKPYECIDCGKAFGSGSNLTQHRRIHTGEKPYECKACGMAFSSGSALTRHQRIHTGEKPYICNECGKAFSFGSALTRHQRIHTGEKP-YVCKECGKAFNSGSDLTQHQR 306          

HSP 6 Score: 133.265 bits (334), Expect = 2.521e-35
Identity = 71/171 (41.52%), Postives = 98/171 (57.31%), Query Frame = 0
Query:  137 QRIVKGEKGFQCHDCGKYFTRKTSLERHYRVHTGEKPFKCEICGKQYSQKSVLQRHLVTHDVLKPYQCQLCQKMFSEKTALRRHYETHSQAKPHKCHLCGKAFGLKEYLSKHMFLHKGLKPYECKVCEKSFADSSAYKRHCLTHDESKVKLLCSSCNKTFKTQRTLKIHQQ 307
            Q I  GEK ++C +CGK F+ +++L RH+R+HTGEKP++C  CGK +   S L +H   H   KPY+C+ C   FS  +AL RH   H+  KP+ C+ CGKAF     L++H  +H G KPY CK C K+F   S   +H   H   K    C  C K F++   L  HQ+
Sbjct:  165 QIIHSGEKPYECKECGKSFSFESALIRHHRIHTGEKPYECIDCGKAFGSGSNLTQHRRIHTGEKPYECKACGMAFSSGSALTRHQRIHTGEKPYICNECGKAFSFGSALTRHQRIHTGEKPYVCKECGKAFNSGSDLTQHQRIHTGEKP-YECKECEKAFRSGSKLIQHQR 334          

HSP 7 Score: 128.642 bits (322), Expect = 1.243e-33
Identity = 62/149 (41.61%), Postives = 95/149 (63.76%), Query Frame = 0
Query:  137 QRIVKGEKGFQCHDCGKYFTRKTSLERHYRVHTGEKPFKCEICGKQYSQKSVLQRHLVTHDVLKPYQCQLCQKMFSEKTALRRHYETHSQAKPHKCHLCGKAFGLKEYLSKHMFLHKGLKPYECKVCEKSFADSSAYKRHCLTHDESKV 285
            QR+  GEK ++C +CGK F+  + L +H+R+HTGEKP++C+ CGK +   S L +H + H   +PY+C+ C K FS  +AL RH   H+  KP++C  CGKAF     L++H  +H G K YECK C K++   S +++H  +H+  K+
Sbjct:  333 QRMHTGEKPYECKECGKTFSSGSDLTQHHRIHTGEKPYECKECGKAFGSGSKLIQHQLIHTGERPYECKECGKSFSSGSALNRHQRIHTGEKPYECKECGKAFYSGSSLTQHQRIHTGEKLYECKNCGKAYGRDSEFQQHKKSHNGKKL 481          

HSP 8 Score: 127.487 bits (319), Expect = 3.603e-33
Identity = 70/171 (40.94%), Postives = 93/171 (54.39%), Query Frame = 0
Query:  137 QRIVKGEKGFQCHDCGKYFTRKTSLERHYRVHTGEKPFKCEICGKQYSQKSVLQRHLVTHDVLKPYQCQLCQKMFSEKTALRRHYETHSQAKPHKCHLCGKAFGLKEYLSKHMFLHKGLKPYECKVCEKSFADSSAYKRHCLTHDESKVKLLCSSCNKTFKTQRTLKIHQQ 307
            QRI   EK  +C +CGK F+  + L RH R+HTGEKP++C+ CGK +   + L  H   H   KP++C+ C K F   + L  H   H+  KP++C  CGKAF     L +H  +H G KPYECK C KSF+  SA  RH   H   K    C  C K F +   L  H++
Sbjct:   53 QRIHTDEKLLECKECGKDFSFVSVLVRHQRIHTGEKPYECKECGKAFGSGANLAYHQRIHTGEKPFECKECGKAFGSGSNLTHHQRIHTGEKPYECKECGKAFSFGSGLIRHQIIHSGEKPYECKECGKSFSFESALIRHHRIHTGEKP-YECIDCGKAFGSGSNLTQHRR 222          

HSP 9 Score: 124.79 bits (312), Expect = 2.695e-32
Identity = 71/174 (40.80%), Postives = 94/174 (54.02%), Query Frame = 0
Query:  133 LSHPQRIVKGEKGFQCHDCGKYFTRKTSLERHYRVHTGEKPFKCEICGKQYSQKSVLQRHLVTHDVLKPYQCQLCQKMFSEKTALRRHYETHSQAKPHKCHLCGKAFGLKEYLSKHMFLHKGLKPYECKVCEKSFADSSAYKRHCLTHDESKVKLLCSSCNKTFKTQRTLKIHQ 306
            L+  +RI  GEK ++C  CG  F+  ++L RH R+HTGEKP+ C  CGK +S  S L RH   H   KPY C+ C K F+  + L +H   H+  KP++C  C KAF     L +H  +H G KPYECK C K+F+  S   +H   H   K    C  C K F +   L  HQ
Sbjct:  217 LTQHRRIHTGEKPYECKACGMAFSSGSALTRHQRIHTGEKPYICNECGKAFSFGSALTRHQRIHTGEKPYVCKECGKAFNSGSDLTQHQRIHTGEKPYECKECEKAFRSGSKLIQHQRMHTGEKPYECKECGKTFSSGSDLTQHHRIHTGEKP-YECKECGKAFGSGSKLIQHQ 389          

HSP 10 Score: 122.865 bits (307), Expect = 1.372e-31
Identity = 69/187 (36.90%), Postives = 103/187 (55.08%), Query Frame = 0
Query:  133 LSHPQRIVKGEKGFQCHDCGKYFTRKTSLERHYRVHTGEKPFKCEICGKQYSQKSVLQRHLVTHDVLKPYQCQLCQKMFSEKTALRRHYETHSQAKPHKCHLCGKAFGLKEYLSKHMFLHKGLKPYECKVCEKSFADSSAYKRHCLTHDESKVKLLCSSCNKTFKTQRTLKIHQQKCQQHMLRNLQT 319
            L+  QRI  GEK ++C +C K F   + L +H R+HTGEKP++C+ CGK +S  S L +H   H   KPY+C+ C K F   + L +H   H+  +P++C  CGK+F     L++H  +H G KPYECK C K+F   S+  +H   H   K+   C +C K +      + H++      L  L+T
Sbjct:  301 LTQHQRIHTGEKPYECKECEKAFRSGSKLIQHQRMHTGEKPYECKECGKTFSSGSDLTQHHRIHTGEKPYECKECGKAFGSGSKLIQHQLIHTGERPYECKECGKSFSSGSALNRHQRIHTGEKPYECKECGKAFYSGSSLTQHQRIHTGEKL-YECKNCGKAYGRDSEFQQHKKSHNGKKLCELET 486          

HSP 11 Score: 107.457 bits (267), Expect = 5.196e-26
Identity = 60/145 (41.38%), Postives = 77/145 (53.10%), Query Frame = 0
Query:  163 RHYRVHTGEKPFKCEICGKQYSQKSVLQRHLVTHDVLKPYQCQLCQKMFSEKTALRRHYETHSQAKPHKCHLCGKAFGLKEYLSKHMFLHKGLKPYECKVCEKSFADSSAYKRHCLTHDESKVKLLCSSCNKTFKTQRTLKIHQQ 307
            +H R+HT EK  +C+ CGK +S  SVL RH   H   KPY+C+ C K F     L  H   H+  KP +C  CGKAFG    L+ H  +H G KPYECK C K+F+  S   RH + H   K    C  C K+F  +  L  H +
Sbjct:   51 QHQRIHTDEKLLECKECGKDFSFVSVLVRHQRIHTGEKPYECKECGKAFGSGANLAYHQRIHTGEKPFECKECGKAFGSGSNLTHHQRIHTGEKPYECKECGKAFSFGSGLIRHQIIHSGEKP-YECKECGKSFSFESALIRHHR 194          
The following BLAST results are available for this feature:
BLAST of TCONS_00056335-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN3451.860e-4244.69Zinc finger protein 345 OS=Homo sapiens GN=ZNF345 ... [more]
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