Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00056352-protein ID=TCONS_00056352-protein|Name=TCONS_00056352-protein|organism=Clytia hemisphaerica|type=polypeptide|length=123bp DNNCRYDHSKANVTISGYEDIPFADETEQVAALNDHGPISVCVDAGHLSF QLYSSGVFYDPNCDPFSINHAVIAVGFGSEGGSDYWIIKNSWGTGWGDDG YMKVSRNRNNHCGIATQSCYPII Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term Definition
GO:0006508 proteolysis
Vocabulary: Molecular Function
Term Definition
GO:0008234 cysteine-type peptidase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0006508
proteolysis
molecular_function
GO:0008234
cysteine-type peptidase activity
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
D N N C R Y D H S K A N V T I S G Y E D I P F A D E T E Q V A A L N D H G P I S V C V D A G H L S F Q L Y S S G V F Y D P N C D P F S I N H A V I A V G F G S E G G S D Y W I I K N S W G T G W G D D G Y M K V S R N R N N H C G I A T Q S C Y P I I 10 20 30 40 50 60 70 80 90 100 110 120 Expect = 2.0E-8 / Score = 23.5 Expect = 5.0E-39 / Score = 134.6 Expect = 1.3E-27 / Score = 95.2 Expect = 7.4E-17 / Score = 61.4 Expect = 1.15948E-53 / Score = 168.571 Score = Score = Sequence SM00645 PF00112 G3DSA:2.40.50.170 G3DSA:3.90.70.10 cd02248 SSF54001 PS00640
IPR Term IPR Description Source Source Term Source Description Alignment
IPR000668 Peptidase C1A, papain C-terminal SMART SM00645 pept_c1 coord: 1..122 e-value: 2.0E-8 score: 23.5
IPR000668 Peptidase C1A, papain C-terminal PFAM PF00112 Peptidase_C1 coord: 2..122 e-value: 5.0E-39 score: 134.6
None No IPR available GENE3D 2.40.50.170 coord: 72..123 e-value: 1.3E-27 score: 95.2
None No IPR available GENE3D 3.90.70.10 coord: 1..71 e-value: 7.4E-17 score: 61.4
None No IPR available CDD cd02248 Peptidase_C1A coord: 1..121 e-value: 1.15948E-53 score: 168.571
None No IPR available SUPERFAMILY 54001 Cysteine proteinases coord: 1..122
IPR025661 Cysteine peptidase, asparagine active site PROSITE PS00640 THIOL_PROTEASE_ASN coord: 85..104
Blast
BLAST of TCONS_00056352-protein vs. Swiss-Prot (Human)
Match:
CATS (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)
HSP 1 Score: 124.79 bits (312), Expect = 8.659e-36
Identity = 56/123 (45.53%), Postives = 82/123 (66.67%), Query Frame = 0
Query: 1 DNNCRYDHSKANVTISGYEDIPFADETEQVAALNDHGPISVCVDAGHLSFQLYSSGVFYDPNCDPFSINHAVIAVGFGSEGGSDYWIIKNSWGTGWGDDGYMKVSRNRNNHCGIATQSCYPII 123
D C+YD T S Y ++P+ E A+ + GP+SV VDA H SF LY SGV+Y+P+C ++NH V+ VG+G G +YW++KNSWG +G++GY++++RN+ NHCGIA+ YP I
Sbjct: 210 DQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQ-NVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 331
The following BLAST results are available for this feature:
BLAST of TCONS_00056352-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
D N N C R Y D H S K A N V T I S G Y E D I P F A D E T E Q V A A L N D H G P I S V C V D A G H L S F Q L Y S S G V F Y D P N C D P F S I N H A V I A V G F G S E G G S D Y W I I K N S W G T G W G D D G Y M K V S R N R N N H C G I A T Q S C Y P I I 10 20 30 40 50 60 70 80 90 100 110 120 Expect = 8.66e-36 / Id = 45.53 Sequence CATS
Match Name E-value Identity Description
CATS 8.659e-36 45.53 Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3 [more]
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