TCONS_00056369-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056369-protein
Unique NameTCONS_00056369-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length324

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056369-protein ID=TCONS_00056369-protein|Name=TCONS_00056369-protein|organism=Clytia hemisphaerica|type=polypeptide|length=324bp
MELTLLITLLAFRFSLSQENPTLPFLPFKHLHSNTAIDGPQPWFDGEVPS
KDHCFHKCIKQNFTNCEYVQYKEVSATTWLCKLYGIISDLSNYLISTEGE
MLAQAVHQNIDCQDWYDKGYKQSGVFFIYYERYKMKVWCKMYGAPYFVGM
IEIQKRKDGSVNFNRTWNEYKVGFGDPATEYWLGNDNIHKLTYGRNMLLR
IGADPFIGNSVYTIFENFFIENEANNYTIHTGAPHPNFDSYAVNGDWIFH
DQKPFSTIDRDLNGFNCPFTYKCGWWFNYCFKMNFNGVYKFNEATTNRQG
IIWTAFIGNEKSLKKSSLSITRMT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035517XLOC_035517Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056369TCONS_00056369Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014715Fibrinogen_a/b/g_C_2
IPR014716Fibrinogen_a/b/g_C_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 107..323
e-value: 6.1E-34
score: 128.8
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 111..320
e-value: 5.4E-48
score: 163.6
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 103..324
score: 38.098
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 109..321
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 256..314
e-value: 5.6E-16
score: 58.0
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 60..255
e-value: 4.0E-39
score: 134.1

Blast
[Close]
BLAST of TCONS_00056369-protein vs. Swiss-Prot (Human)
Match: ANGL6 (Angiopoietin-related protein 6 OS=Homo sapiens GN=ANGPTL6 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.586e-36
Identity = 75/217 (34.56%), Postives = 119/217 (54.84%), Query Frame = 0 
Query:  111 DCQDWYDKGYKQSGVFFIYYERYKMKVWC--KMYGAPYFVGMIEIQKRKDGSVNFNRTWNEYKVGFGDPATEYWLGNDNIHKLTYGRNMLLRIGADPFIGNSVYTIFENFFIENEANNYTIHTGAPHPNFDSYAVNGDWI-FHDQKPFSTIDRDLNGF--NCPFTYKCGWWFNYCFKMNFNGVYKFNEATTNR--QGIIWTAFIGNEKSLKKSSLSI 320
            DC +    G++QSGV+ +   R+ + VWC  ++ G  + V    IQ+R+DGSVNF  TW  YK GFG P  EYWLG + +++LT   +  L +  + + G      ++ F +E E+++Y +  G  H +       GD + +H+ KPFST+DRD + +  NC    + GWW++ C   N NGV+       +R   G+ W  F G   SL+K+++ I
Sbjct:  259 DCAEARQAGHEQSGVYELRVGRHVVSVWCEQQLEGGGWTV----IQRRQDGSVNFFTTWQHYKAGFGRPDGEYWLGLEPVYQLTSRGDHELLVLLEDWGGRGARAHYDGFSLEPESDHYRLRLGQYHGD------AGDSLSWHNDKPFSTVDRDRDSYSGNCALYQRGGWWYHACAHSNLNGVWHHGGHYRSRYQDGVYWAEFRGGAYSLRKAAMLI 465
The following BLAST results are available for this feature:
BLAST of TCONS_00056369-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANGL62.586e-3634.56Angiopoietin-related protein 6 OS=Homo sapiens GN=... [more]
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