TCONS_00056427-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056427-protein
Unique NameTCONS_00056427-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length394

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056427-protein ID=TCONS_00056427-protein|Name=TCONS_00056427-protein|organism=Clytia hemisphaerica|type=polypeptide|length=394bp
MANVAVNRELHKAGGRSCMHIEIDIADSGIKYSAGDHVGIYPTNDPELVE
KIGKLLNIDLDEVISLDNVDPDASKKHPFPCPCSYRTALLHYVDITSTVK
THVLAELVAHTKDPEELAKLDLMTSSSADGKKMYDEWVVGNNRHIVAVME
DLKSCKPPLDLLLELMPRLQCRYYSISSSSTMHRDRIHVTAVVVDWISKA
DRLHKGVATHWLKTKIPCENIANLRVPIFVRRTNFRLPVRPISPVLMVGP
GTGFAPFRGFIQERQSQQESGKETGDTILYFGCRKRAEDFIYEDELTSYA
EKRVITDLQLAFSRDQEAKEYVTHKLKADMAKIWDVIKKGGHLYVCGDAR
FMAKDVHDIFIDSIVTHGEKSKEQATRFLSSLSDKGRYQVDVWS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035559XLOC_035559Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056427TCONS_00056427Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001709Flavoprot_Pyr_Nucl_cyt_Rdtase
IPR001433OxRdtase_FAD/NAD-bd
IPR003097FAD-binding_1
IPR017927Fd_Rdtase_FAD-bd
IPR017938Riboflavin_synthase-like_b-brl
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001709Flavoprotein pyridine nucleotide cytochrome reductasePRINTSPR00371FPNCRcoord: 246..265
score: 55.63
coord: 319..335
score: 26.77
coord: 342..350
score: 53.38
coord: 206..215
score: 32.18
coord: 275..284
score: 42.41
coord: 288..299
score: 37.55
coord: 32..42
score: 43.05
coord: 172..179
score: 73.42
IPR001433Oxidoreductase FAD/NAD(P)-bindingPFAMPF00175NAD_binding_1coord: 247..357
e-value: 6.1E-17
score: 62.1
NoneNo IPR availableGENE3D3.40.50.80coord: 243..394
e-value: 4.5E-37
score: 126.9
NoneNo IPR availableGENE3D1.20.990.10coord: 1..170
e-value: 2.7E-54
score: 182.7
NoneNo IPR availableCDDcd06204CYPORcoord: 2..393
e-value: 0.0
score: 561.108
NoneNo IPR availableSUPERFAMILY52343Ferredoxin reductase-like, C-terminal NADP-linked domaincoord: 234..393
IPR003097FAD-binding, type 1PFAMPF00667FAD_binding_1coord: 2..211
e-value: 2.3E-69
score: 233.2
IPR017927Ferredoxin reductase-type FAD-binding domainPROSITEPS51384FAD_FRcoord: 1..238
score: 13.172
IPR017938Riboflavin synthase-like beta-barrelSUPERFAMILY63380Riboflavin synthase domain-likecoord: 2..235

Blast
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BLAST of TCONS_00056427-protein vs. Swiss-Prot (Human)
Match: NCPR (NADPH--cytochrome P450 reductase OS=Homo sapiens GN=POR PE=1 SV=2)

HSP 1 Score: 437.187 bits (1123), Expect = 5.893e-149
Identity = 201/395 (50.89%), Postives = 278/395 (70.38%), Query Frame = 0 
Query:    1 MANVAVNRELHKAGGRSCMHIEIDIADSGIKYSAGDHVGIYPTNDPELVEKIGKLLNIDLDEVISLDNVDPDASKKHPFPCPCSYRTALLHYVDITSTVKTHVLAELVAHTKDPEELAKLDLMTSSSADGKKMYDEWVVGNNRHIVAVMEDLKSCKPPLDLLLELMPRLQCRYYSISSSSTMHRDRIHVTAVVVDWISKADRLHKGVATHWLKTKIPC-ENIANLRVPIFVRRTNFRLPVRPISPVLMVGPGTGFAPFRGFIQERQSQQESGKETGDTILYFGCRKRAEDFIYEDELTSYAEKRVITDLQLAFSRDQEAKEYVTHKLKADMAKIWDVIKKGGHLYVCGDARFMAKDVHDIFIDSIVTHGEKSKEQATRFLSSLSDKGRYQVDVWS 394
            +A V  NR+L++   R  MH+E+DI+DS I+Y +GDHV +YP ND  LV ++GK+L  DLD V+SL+N+D +++KKHPFPCP SYRTAL +Y+DIT+  +T+VL EL  +  +P E   L  M SSS +GK++Y  WVV   RHI+A+++D  S +PP+D L EL+PRLQ RYYSI+SSS +H + +H+ AVVV++ +KA R++KGVAT+WL+ K P  EN     VP+FVR++ FRLP +  +PV+MVGPGTG APF GFIQER   ++ GKE G+T+LY+GCR+  ED++Y +EL  +     +T L +AFSR+Q  K YV H LK D   +W +I+ G H+YVCGDAR MA+DV + F D +   G     QA  ++  L  KGRY +DVWS
Sbjct:  283 LAAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEESNKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYSLDVWS 677
The following BLAST results are available for this feature:
BLAST of TCONS_00056427-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NCPR5.893e-14950.89NADPH--cytochrome P450 reductase OS=Homo sapiens G... [more]
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