TCONS_00056485-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056485-protein
Unique NameTCONS_00056485-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length242

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056485-protein ID=TCONS_00056485-protein|Name=TCONS_00056485-protein|organism=Clytia hemisphaerica|type=polypeptide|length=242bp
QHTHRQPIKMASAGALLLKQKVPFVMELDGQINEIKFSVRGKGTGDATTG
TIDAKFVCTTGELPVPWASISSAMSYGALCFTKYPDNIKDFFKSTLPDGY
IQERTISYENDGSWKVRGVITYEHGSIYNRVTLKGEGFKRDGHILQKRYD
FCCPNNAVYVLPDKENNGLRVVFNKAFKLKDGGYHCAKHEQQNIPLGGGV
VDIPIYHHLHVGNIFSRDPEETRDHLCLIEKLTAIDLETYNN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035583XLOC_035583Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056485TCONS_00056485Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000786Green_fluorescent_prot
IPR011584GFP-related
IPR009017GFP
Vocabulary: Biological Process
TermDefinition
GO:0006091generation of precursor metabolites and energy
GO:0008218bioluminescence
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008218 bioluminescence
biological_process GO:0006091 generation of precursor metabolites and energy
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000786Green fluorescent protein, GFPPRINTSPR01229GFLUORESCENTcoord: 138..157
score: 30.0
coord: 181..200
score: 50.0
coord: 201..219
score: 36.84
coord: 38..58
score: 57.14
coord: 59..79
score: 50.48
coord: 158..179
score: 36.36
coord: 222..242
score: 29.17
coord: 80..95
score: 37.5
coord: 117..137
score: 33.33
coord: 13..37
score: 44.0
IPR011584Green fluorescent protein-relatedPFAMPF01353GFPcoord: 17..234
e-value: 1.9E-47
score: 161.5
NoneNo IPR availableGENE3D2.40.155.10coord: 16..236
e-value: 1.4E-59
score: 200.9
IPR009017Green fluorescent proteinSUPERFAMILY54511GFP-likecoord: 9..236

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056485-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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