TCONS_00056519-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056519-protein
Unique NameTCONS_00056519-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length251

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056519-protein ID=TCONS_00056519-protein|Name=TCONS_00056519-protein|organism=Clytia hemisphaerica|type=polypeptide|length=251bp
MAKTSSRPNSTYDDGEVIGLPVKFGSGRWKNTKQVSGTRFKICLCGKSKV
GKTSIFMRLQGLDFAEDDPNCPISNFEFKDENDSTVEYSISDPESIDIDS
LTFGDHYRNAHCVVLIYDVTDFSSLDYLSYEIEKIEKNNYTPYAKYVLLR
NKIDKKSSKHIPLAKQKEFFANSKLRLKIDHVVETSAKTNEGILEFFKEE
LPELLVLPSSESKVKAFDRLVSDSQQGLDATDSSPGGRKKKKKKRINCAT
S
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035601XLOC_035601Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056519TCONS_00056519Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 182..204
score: 31.52
coord: 40..61
score: 34.4
coord: 142..155
score: 31.91
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 40..207
e-value: 5.8E-6
score: -35.3
NoneNo IPR availableGENE3D3.40.50.300coord: 26..204
e-value: 2.0E-25
score: 88.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..251
NoneNo IPR availablePROSITEPS51419RABcoord: 32..248
score: 11.964
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 41..200
e-value: 2.5E-13
score: 49.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 38..199

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056519-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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