TCONS_00056574-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056574-protein
Unique NameTCONS_00056574-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length566

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056574-protein ID=TCONS_00056574-protein|Name=TCONS_00056574-protein|organism=Clytia hemisphaerica|type=polypeptide|length=566bp
MRAVNIRPTYDLSTNMGIKETLSDINADHPLHKAKAFYFLFDAAIKTLPR
HLGMYYKHTLLLSPHQVAMLLSVRPFLLIFGSPVLGGIADKTNKFRHVML
ISLLTFLVTYVLVPLVEPVEGFNCKEHVHFNHSANHINISTPVFHKLHKQ
IVSNGARVKVEVHKYYQMVNEEGTNNHQYDGNLMQDLYYTWPFDMYEYEL
TDDITQKVFNVILLITIFGEFFASPSETFADLYTLRALGSNHNRYGWQII
SGLFGFFIVSIAFAASSDIRLQLKDDFCHVGHVINYSPYLFVVYGLVGAC
ILIAATFQYRLFPKPTAPRKDDGCNCDCNFIKALPVLAETPAYTAYAIAV
IFCGFACGVKQLYIYHYLTELGGPHQLIFVVLSVHFISGFLALLASPYLL
ERFGASNLIAGGLLLNGISFVVYSLIKNPWLILIVEPFHGLCQELSWVAI
VTYAGAPPQIGAALQGTVHGLHKGLGLALGYYAVCVLILKFGYVGFFLAT
GLLFFVVFGFYLFVIRMYPKEESIADSYSCYSKIHQQDVDSDGEETVEMF
QKGDYNNETLDRSFLE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035645XLOC_035645Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056574TCONS_00056574Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024989MFS_assoc_dom
IPR020846MFS_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024989Major facilitator superfamily associated domainPFAMPF12832MFS_1_likecoord: 33..497
e-value: 2.7E-48
score: 164.6
NoneNo IPR availableGENE3D1.20.1250.20coord: 34..323
e-value: 2.0E-12
score: 46.3
NoneNo IPR availableGENE3D1.20.1250.20coord: 327..528
e-value: 3.7E-14
score: 52.0
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 345..516
e-value: 4.84582E-10
score: 58.8645
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 204..520
coord: 37..117

Blast
[Close]
BLAST of TCONS_00056574-protein vs. Swiss-Prot (Human)
Match: MFSD6 (Major facilitator superfamily domain-containing protein 6 OS=Homo sapiens GN=MFSD6 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.149e-31
Identity = 145/577 (25.13%), Postives = 236/577 (40.90%), Query Frame = 0 
Query:   25 INADHPLHKAKAFYFLFDAAIKTLPRHLGMYYKHTLLLSPHQVAMLLSVRPFLLIFGSPVLGGIADKTNKFRHVMLISLLTFLVTYVLVPLVEPVEGFNC----KEHVHFNHSANHINI-----STPVFHKLHKQIVS--NGARVKVEVHKYYQM-----VNEEGTNNHQYD--GNLMQDL--------------------------YYTWPFDMYEYELTDDITQKVFNVILLITIFGEFFASPSETFADLYTLRALGSNHNRYGWQIISGLFGFFIVSIAFAASSD---IRLQLKDDFCHVGHVINYSPYLFVVYGLVGACILIAAT---FQYRLFPKPTAPRKDDGCNCDCNFIK-----ALPVLAETPAYTAYAIA---------------------VIFCGFACGVKQLYIYHYLTELGGPHQLIFVVLSVHFISGFLALLASPYLLERFGASNLIAGGLLLNGISFVVYSLIKNPWLILIVEPFHGLCQELSWVAIVTY--AGAPPQIGAALQGTVHGLHKGLGLALGYYAVCVLILKFGYVGFFLATGLLFFVVFGFYLFVIRM-YPKEE 522
            IN D  L  +K FYF F +A  +L   L +YYK  L +SP Q  +L+ +R F+    +P  G +AD+  K + V+L SLL +++  + +  V+P     C    +   H  ++++ + I     S   F  +  ++    N    ++ V     +     +N E T   Q     N M DL                            + P D           + +F VIL++ I GEFF++ S T  D  TL+ LG + +RYG Q + G  G+ +  ++     D   I + +    C      NY   +F+V+G++    LI AT   F+Y  F      + DD    +    +     +     ETP  T+++ A                       F GF  G    ++Y +L +L G   L  V   +  +S   A   S  L+E  G   ++  GL  N   ++  S ++N W +L +E   G+     W A ++Y  A  PP++  + QG + GLH GLG   G     VL+  FG    F   G+   V+   +  +  +  P EE
Sbjct:   64 INND--LLISKVFYFFFYSAYGSLYPLLPVYYKQ-LGMSPSQSGLLVGIRYFIEFCSAPFWGVVADRFKKGKIVLLFSLLCWVLFNLGIGFVKPAT-LRCVPKIRPTTHPTNASHQLTILPTNSSFTSFLTISPKMREKRNLLETRLNVSDTVTLPTAPNMNSEPTLQPQTGEITNRMMDLTLNSSTATPVSPGSVTKETTTVIVTTTKSLPSDQVMLVYDQQEVEAIFLVILVVVIIGEFFSASSVTIVDTVTLQYLGKHRDRYGLQRMWGSLGWGLAMLSVGIGIDYTHIEVLIDGKGCKPPEYRNYQ-IVFIVFGVLMTMALIVATQFRFRYNHF------KNDDSKGKEVEIPQVERNNSTESSEETPTTTSHSQAFNFWDLIKLLCSVQYGSVLFVAWFMGFGYGFVFTFLYWHLEDLNGTTTLFGVCSVLSHVSELTAYFFSHKLIELIGHIRVLYIGLACNTARYIYISYLENAWTVLPMEVLQGVTHAAIWAACISYLSAAVPPELRTSAQGILQGLHLGLGRGCGAMIGGVLVNYFGAAATFRGIGMACLVILLLFALIQWLAVPDEE 629
The following BLAST results are available for this feature:
BLAST of TCONS_00056574-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MFSD62.149e-3125.13Major facilitator superfamily domain-containing pr... [more]
back to top