TCONS_00056619-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056619-protein
Unique NameTCONS_00056619-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length407

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056619-protein ID=TCONS_00056619-protein|Name=TCONS_00056619-protein|organism=Clytia hemisphaerica|type=polypeptide|length=407bp
STHRFCIKGPAKCHSKSFKHFCIKAEVEKSIMKLGTLLLATCLAFASGAW
VPEMENEGLYEGDMILDPDQQKEVEDGTFTFSSTGNRNKLWPNAVVPYSL
TSDLARDGKFMREFQHSIDQYHKYTCIRFKRRSNERAYIGFYMGGGCSSP
VGYTGGRNRVSLSKGCHWRSTIMHEIGHSLGFHHEQSRPDRDNHVTILFH
NVARGTEHNFKKQSYSTTDSKGTPYDYRSMMHYSWDAFGSGKMTIQTKDP
SMQYEIGIGQGDQGFSDIDIKQLNLLYGCSQSNERLPPYTPPSKDCHDLR
GCASQVHEGNCQSSSWQTYLRKHCRKSCGFCKVTGGPNTPKPWTPGPDTP
RPNTPKPWTPKPDTPRPGNCYDRVIDCYKLGRHQCNSSSSAWRNYMRRSC
RRYCNLC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035657XLOC_035657Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056619TCONS_00056619Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001506Peptidase_M12A
IPR006026Peptidase_Metallo
IPR003582ShKT_dom
IPR024079MetalloPept_cat_dom
IPR034035Astacin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001506Peptidase M12APRINTSPR00480ASTACINcoord: 224..239
score: 51.88
coord: 166..184
score: 46.58
coord: 265..278
score: 42.62
coord: 185..202
score: 50.56
coord: 114..132
score: 29.21
IPR001506Peptidase M12APFAMPF01400Astacincoord: 90..280
e-value: 1.5E-56
score: 191.0
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 87..229
e-value: 2.1E-43
score: 160.2
IPR003582ShKT domainSMARTSM00254ShkT_1coord: 295..332
e-value: 0.0017
score: 27.6
coord: 369..407
e-value: 3.6
score: 15.2
IPR003582ShKT domainPFAMPF01549ShKcoord: 296..331
e-value: 1.6E-6
score: 28.4
coord: 369..407
e-value: 0.0021
score: 18.5
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 296..331
score: 9.448
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 370..407
score: 6.699
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 82..281
e-value: 1.7E-55
score: 187.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 339..367
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 86..280
IPR034035Astacin-like metallopeptidase domainCDDcd04280ZnMc_astacin_likecoord: 93..277
e-value: 1.97764E-74
score: 231.306

Blast
[Close]
BLAST of TCONS_00056619-protein vs. Swiss-Prot (Human)
Match: MEP1B (Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=1 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 1.451e-34
Identity = 100/271 (36.90%), Postives = 136/271 (50.18%), Query Frame = 0 
Query:   31 IMKLGTLLLATCLAFASGAWVPE-------ME------NEGL----YEGDMILDPDQQKEVEDGTFTFSSTGNRNKLWPNAVVPYSLTSDLARDGKFMREFQHSIDQYHKYTCIRFKRRSNERAYIGFYMGGGCSSPVG-YTGGRNRVSLSKGCHWRSTIMHEIGHSLGFHHEQSRPDRDNHVTILFHNVARGTEHNFKKQSYSTTDSKGTPYDYRSMMHYSWDAFGSG-KMTIQTKDPSMQYEIGIGQGDQGFSDIDIKQLNLLYGCSQS 282
            +  L   L    L   SG   PE       M+      NEGL    +EGD+ LD  Q +         S  G + + WP+ + PY L   L  + K +    ++ ++Y   TCI FK  + E  YI  + G GC S VG    G+  +S+   C   +T+ HE  H+LGF HEQSR DRD++V I++  +  G EHNF   S   +DS   PYDY S+MHYS  AF +G + TI T+     +E  IGQ    FSD D+ +LN LY CS S
Sbjct:    3 LWNLSWFLFLDALLVISGLATPENFDVDGGMDQDIFDINEGLGLDLFEGDIRLDRAQIRN--------SIIGEKYR-WPHTI-PYVLEDSLEMNAKGV--ILNAFERYRLKTCIDFKPWAGETNYISVFKGSGCWSSVGNRRVGKQELSIGANCDRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQNGTEPTIVTRIS--DFEDVIGQ-RMDFSDSDLLKLNQLYNCSSS 258
The following BLAST results are available for this feature:
BLAST of TCONS_00056619-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1B1.451e-3436.90Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=... [more]
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