unclassified Wnt ligand 9 (polypeptide) - C. hemisphaerica

Overview
Nameunclassified Wnt ligand 9
Unique NameTCONS_00056741-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length367

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056741-protein ID=TCONS_00056741-protein|Name=unclassified Wnt ligand 9|organism=Clytia hemisphaerica|type=polypeptide|length=367bp
MIGFGMKTRLAIIYCACVLFSLFGACSNVELKMNDIESMNPYVLCSSIPK
YIKKGTNLKCSMEKQKLTNVYRGIRVAAKECRYQFQMRPWNCSAAFESAP
RITYYPIPETAFLYAINSAGIAYSLAWACYEGKTKDCMCEKQKSVNITTE
TLLKHQANQKSPEQPHIMEDRKCAKHSLQYGIEESMQLLENKHENDIRWR
MDNHNKQAGRLALIDGPINKNRVCSCHGVSGACTISKCTLKLPKFGDVSD
YLMEKYKSAVRMGSNNHGHLIPHRDTLNKKPTENDLVYLQESPSFCSKDK
KYGILGTKDRVCDPKSKGPQGCDVLCCNRGSEKIVEVEKRQCKCKFKYCC
EVKCQTCEKRVELDVCK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035748XLOC_035748Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056741TCONS_00056741Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005817Wnt
Vocabulary: Molecular Function
TermDefinition
GO:0005102receptor binding
Vocabulary: Biological Process
TermDefinition
GO:0007275multicellular organism development
GO:0016055Wnt signaling pathway
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0016055 Wnt signaling pathway
cellular_component GO:0005576 extracellular region
molecular_function GO:0005102 receptor binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005817WntPRINTSPR01349WNTPROTEINcoord: 108..122
score: 54.32
coord: 285..296
score: 60.18
coord: 127..140
score: 37.65
coord: 225..239
score: 53.99
IPR005817WntSMARTSM00097wnt1_3coord: 47..367
e-value: 3.6E-53
score: 192.6
IPR005817WntPFAMPF00110wntcoord: 58..367
e-value: 4.1E-76
score: 256.4
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..26
score: 5.0

Blast
[Close]
BLAST of unclassified Wnt ligand 9 vs. Swiss-Prot (Human)
Match: WNT4 (Protein Wnt-4 OS=Homo sapiens GN=WNT4 PE=1 SV=4)

HSP 1 Score: 191.045 bits (484), Expect = 9.824e-58
Identity = 123/367 (33.51%), Postives = 199/367 (54.22%), Query Frame = 0 
Query:   18 VLFSLFGACSNVEL---KMNDIESMNPYVLCSSIPKYIKKGTNLKCSMEKQKLTNVYRGIRVAAKECRYQFQMRPWNCSAAFESAP---RITYYPIPETAFLYAINSAGIAYSLAWACYEGKTKDCMCEKQKSVNITTETLLKHQANQKSPEQPHIMEDRKCAKHSLQYGIEESMQLLE----NKHENDIRWRMDNHNKQAGRLALIDGPINKNRV-CSCHGVSGACTISKCTLKLPKFGDVSDYLMEKYKSAV-----RMGSNNHGHLIPHRDTLNKKPTENDLVYLQESPSFCSKDKKYGILGTKDRVCDPKSKGPQGCDVLCCNRGSEKI-VEVEKRQCKCKFKYCCEVKCQTCEKRVELDVCK 367
            ++F++F A ++  L   K++ + S++    C  +   I++   + C    + + +V RG ++A +EC+YQF+ R WNCS   +S P   ++      E AF+YAI+SAG+A+++  AC  G+ + C C++  +V+  +               P   +   C+ + + YG+  S   ++    +K  +  R  M+ HN +AGR A++       RV C CHGVSG+C +  C   +P F  V   L EK+  A      R+GS+    L+P R+   K  T+ DLVYL+ SP FC +D + G+LGT+ R C+  SK   GC++LCC RG     VE+ +R C CKF +CC VKC+ C++ VEL  C+
Sbjct:   13 LVFAVFSAAASNWLYLAKLSSVGSISEEETCEKLKGLIQRQVQM-CKRNLEVMDSVRRGAQLAIEECQYQFRNRRWNCST-LDSLPVFGKVVTQGTREAAFVYAISSAGVAFAVTRACSSGELEKCGCDR--TVHGVS---------------PQGFQWSGCSDN-IAYGVAFSQSFVDVRERSKGASSSRALMNLHNNEAGRKAIL----THMRVECKCHGVSGSCEVKTCWRAVPPFRQVGHALKEKFDGATEVEPRRVGSSRA--LVP-RNAQFKPHTDEDLVYLEPSPDFCEQDMRSGVLGTRGRTCNKTSKAIDGCELLCCGRGFHTAQVELAER-CSCKFHWCCFVKCRQCQRLVELHTCR 351
The following BLAST results are available for this feature:
BLAST of unclassified Wnt ligand 9 vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WNT49.824e-5833.51Protein Wnt-4 OS=Homo sapiens GN=WNT4 PE=1 SV=4[more]
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