TCONS_00056768-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056768-protein
Unique NameTCONS_00056768-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length315

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056768-protein ID=TCONS_00056768-protein|Name=TCONS_00056768-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
MVEIVTSAPGKIILCGEHAVVYGKEALAFSLSTTTQCCLKENMNNPSQIR
IKVPDLQIDETYNGEDLEKAYGDSLQKGSGDVQTCQLFENEEDIYERLLS
PEIDGTKKAALKLILVLYMHLAHSQTTPRKIGLCISFKSDLPIGAGLGSS
ASFAVATVSAMLVYTGVLPSNQSDWTEKDYEVINGWAYQSERIVHGTPSG
IDNSISTYGQCVSFKSKKIERLKNFSELNLKVVLINTKKSRSTKALVTGV
RQRNDKYPKIYPHIMDTIEQVTEKFKHNLMELSSDNAKERDEIYQNIEEE
TESSCKATRQRGCRR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035757XLOC_035757Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056768TCONS_00056768Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006204GHMP_kinase_N_dom
IPR006205Mev_gal_kin
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR013750GHMP_kinase_C_dom
IPR006203GHMP_knse_ATP-bd_CS
IPR020568Ribosomal_S5_D2-typ_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004496mevalonate kinase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008299 isoprenoid biosynthetic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005524 ATP binding
molecular_function GO:0004496 mevalonate kinase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00959MEVGALKINASEcoord: 8..32
score: 38.71
coord: 139..161
score: 46.8
coord: 191..210
score: 28.68
IPR006204GHMP kinase N-terminal domainPFAMPF00288GHMP_kinases_Ncoord: 135..209
e-value: 5.5E-19
score: 68.1
IPR006205Mevalonate kinaseTIGRFAMTIGR00549TIGR00549coord: 8..282
e-value: 1.4E-52
score: 176.9
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 2..239
e-value: 1.9E-52
score: 177.7
IPR013750GHMP kinase, C-terminal domainGENE3D3.30.70.890coord: 240..313
e-value: 7.9E-8
score: 31.8
IPR013750GHMP kinase, C-terminal domainSUPERFAMILY55060GHMP Kinase, C-terminal domaincoord: 227..293
IPR006203GHMP kinase, ATP-binding, conserved sitePROSITEPS00627GHMP_KINASES_ATPcoord: 141..152
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 3..220

Blast
[Close]
BLAST of TCONS_00056768-protein vs. Swiss-Prot (Human)
Match: KIME (Mevalonate kinase OS=Homo sapiens GN=MVK PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 7.719e-50
Identity = 105/329 (31.91%), Postives = 178/329 (54.10%), Query Frame = 0 
Query:    4 IVTSAPGKIILCGEHAVVYGKEALAFSLSTTTQCCLKENMNNPSQIRIKVPDLQIDETYNGEDLEKAYGDSLQKGSGDVQTCQLFENEEDIYERLLSPEIDGTKKAALKLILVLYMHLAHSQTTPRKIGLCISFKSDLPIGAGLGSSASFAVATVSAMLVYTGVLPSNQSD------WTEKDYEVINGWAYQSERIVHGTPSGIDNSISTYGQCVSFKSKKIERLKNFSELNLKVVLINTKKSRSTKALVTGVRQRNDKYPKIYPHIMDTIEQVTEKFKHNLMELSSDNAKERDEIYQNI--------------EEETESSCKATRQRG 312
            ++ SAPGK+IL GEHAVV+GK ALA SL+  T   L+ + N   ++ + +P++ I   ++   L+      L++G     T +  E  +++    L  +   T++ A+   L LY+ +   Q     + + +   S+LP GAGLGSSA+++V   +A+L     +P+   D      WT++D E+IN WA+Q ER++HG PSG+DN++ST+G  + +   KI  LK      L+++L NTK  R+T+ALV GVR R  K+P+I   ++ +I+ ++ + +  L E+    A E+  + + +                  +  C+ TR RG
Sbjct:    6 LLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNG--KVDLSLPNIGIKRAWDVARLQSLDTSFLEQGDVTTPTSEQVEKLKEVAG--LPDDCAVTERLAVLAFLYLYLSICRKQRALPSLDIVV--WSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLELINKWAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPA--LQILLTNTKVPRNTRALVAGVRNRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDMNQHHLNALGVGHASLDQLCQVTRARG 326
The following BLAST results are available for this feature:
BLAST of TCONS_00056768-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KIME7.719e-5031.91Mevalonate kinase OS=Homo sapiens GN=MVK PE=1 SV=1[more]
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