TCONS_00056790-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056790-protein
Unique NameTCONS_00056790-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length218

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056790-protein ID=TCONS_00056790-protein|Name=TCONS_00056790-protein|organism=Clytia hemisphaerica|type=polypeptide|length=218bp
HRHLSERKVTSLLQHNHITSTPNFYLIHSLTINNMVMTRRPKRAASPKRK
ASPSRRAASPKRKASPRRAASPKRRRSPSRRSVSPKRRTSPARRSVSPRR
KVSPRRSVSPKRRRSPSRRSVSPRRKASPRRSASPRRRASPKRKASPRRS
ASPRRRTSPRRSASPKRRRSPARRSVSPKRRSSPKRKSSPKRKASPSRRS
RSTRRAAAKARRNLKHCF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035770XLOC_035770Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056790TCONS_00056790Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005819Histone_H5
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006334 nucleosome assembly
cellular_component GO:0000786 nucleosome
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005819Histone H5PRINTSPR00624HISTONEH5coord: 160..177
score: 22.22
coord: 124..138
score: 32.59
coord: 46..63
score: 24.07
coord: 182..201
score: 30.56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..218

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056790-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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