TCONS_00056825-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056825-protein
Unique NameTCONS_00056825-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length281

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056825-protein ID=TCONS_00056825-protein|Name=TCONS_00056825-protein|organism=Clytia hemisphaerica|type=polypeptide|length=281bp
MKVWFFGLLFVAIALNCVICEGDDCDNDCDDDCSDDCSPGPCEGDDCCDN
LCADDCSPGPQGPEGPPGADGPTGPPGPEGPPGPAGADGPPGPQGDTGPM
GPPGPQGDIGPQGETGPAGPPGPIQLCGCGIKSHYFVPEGASPMLSWEAA
QDLCEANMANLVGIHNLKENLYITAKYFSLNTIWIGLLNDLANSKFKWID
NDISDYRNWCTGTPPTGATGCVLLDFENANSDAPGCFKLVPCTEDHAYIC
EFKVDYDDNGISLVQALSTNIWQQRCPSCIE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035799XLOC_035799Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056825TCONS_00056825Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001304C-type_lectin-like
IPR008160Collagen
IPR016186C-type_lectin-like/link
IPR016187CTDL_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001304C-type lectin-likeSMARTSM00034CLECT_2coord: 127..251
e-value: 6.2E-16
score: 68.9
IPR001304C-type lectin-likePFAMPF00059Lectin_Ccoord: 145..252
e-value: 1.3E-13
score: 51.5
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 135..251
score: 16.576
IPR008160Collagen triple helix repeatPFAMPF01391Collagencoord: 65..121
e-value: 9.8E-8
score: 31.5
NoneNo IPR availableGENE3D2.160.20.50coord: 42..127
e-value: 1.5E-10
score: 40.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..122
NoneNo IPR availableCDDcd00037CLECTcoord: 145..252
e-value: 6.53037E-19
score: 78.8157
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 128..263
e-value: 7.3E-22
score: 77.5
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 141..255

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056825-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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