TCONS_00056919-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056919-protein
Unique NameTCONS_00056919-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length641

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056919-protein ID=TCONS_00056919-protein|Name=TCONS_00056919-protein|organism=Clytia hemisphaerica|type=polypeptide|length=641bp
MSGRKDNMKSEELKNILMTFRIADLQSLLTNCGRSRSGRKHELLGRALSL
LKTNDSTRVQVKKKILEIHNQRFPSSRQMPPNATMHHNSYQQHQPSYASY
NSDKHEDSYSMHRSSSSYKHSSQNALSSSSSQNHGSYNSHPSYSQNNSIY
GRGSSSSGNNYSTSTSSMPIHLDVKFIDLPFYNVIDVLVKPTSLVQKTVV
GYQDTDFLFHLTPYQCQLINSSRAYNSKQAIEYTVQIQLRFCLAEVSCVQ
EDLYPSRCKLSINGKGLTLPGQPPPNAQNQEPRKPHRPINITHICRLTPT
QANQIHVQWMPSDMGQRWTATVHLVKVVQPETLIQQLKAKTERPPAHTLA
FIKEKLKQDPDSEIALTSLKVSLCCPIGRTRMTMPCRATNCKHLQCFDGS
LYIQMNERKPSWVCPVCDQKAYYDQLFKDGMFMDIMEQSVHCDEIMFFED
GSWRSASEIEESSKPLSQVVQTPARQTNGGTANSSANDESSPPSPININT
PPLIKQDDRPFHNTPPPKMPQLDRIPTENSEEPGDKGDDEEVEVICIDDS
DDDDVAPPPSRSSHPPPPLTRAPADSNRPPLPFPDPDLQGLDLYNILPYE
DRIAAAMHLDQNNYCANLGGSNNSNNSRTSSSASIIDISDE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035857XLOC_035857Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056919TCONS_00056919Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR004181Znf_MIZ
IPR023321PINIT
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainSMARTSM00513sap_9coord: 17..51
e-value: 0.0036
score: 26.5
IPR003034SAP domainGENE3D1.10.720.30coord: 9..71
e-value: 1.2E-15
score: 56.4
IPR003034SAP domainPROSITEPS50800SAPcoord: 17..51
score: 9.846
IPR003034SAP domainSUPERFAMILY68906SAP domaincoord: 11..70
IPR004181Zinc finger, MIZ-typePFAMPF02891zf-MIZcoord: 371..419
e-value: 2.6E-19
score: 68.6
IPR004181Zinc finger, MIZ-typePROSITEPS51044ZF_SP_RINGcoord: 360..437
score: 37.994
IPR023321PINIT domainPFAMPF14324PINITcoord: 173..326
e-value: 7.6E-27
score: 94.4
IPR023321PINIT domainPROSITEPS51466PINITcoord: 162..328
score: 37.875
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 355..551
e-value: 1.3E-4
score: 21.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 618..641
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 458..586
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..286

Blast
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BLAST of TCONS_00056919-protein vs. Swiss-Prot (Human)
Match: PIAS1 (E3 SUMO-protein ligase PIAS1 OS=Homo sapiens GN=PIAS1 PE=1 SV=2)

HSP 1 Score: 363.229 bits (931), Expect = 5.615e-117
Identity = 197/457 (43.11%), Postives = 275/457 (60.18%), Query Frame = 0 
Query:   10 SEELKNILMTFRIADLQSLLTNCGRSRSGRKHELLGRALSLLKTNDSTRVQVKKKILEIHNQRFPSSRQMPPNATMHHNSYQQHQPSYASYNSDKHEDSYSMHRSSSSYKHSSQNALSSSSSQNHGSYNSHPSYSQNNSIYGRGSSSSGNNYSTSTSSMPIHLDVKFIDLPFYNVIDVLVKPTSLVQKTVVGYQDTDFLFHLTPYQCQLINSSRAYNSKQAIEYTVQIQLRFCLAEVSCVQEDLYPSRCKLSINGKGLTLPGQPPPNAQNQEPRKPHRPINITHICRLTPTQANQIHVQWMPSDMGQRWTATVHLVKVVQPETLIQQLKAKTERPPAHTLAFIKEKLKQDPDSEIALTSLKVSLCCPIGRTRMTMPCRATNCKHLQCFDGSLYIQMNERKPSWVCPVCDQKAYYDQLFKDGMFMDIMEQSVHCDEIMFFEDGSW---RSASEIEESS 463
            S ELK ++M+ R+++LQ LL   GR++ GRKHELL +AL LLK   S  VQ+K K  E++ +RFP     P + ++         P+  S                     S   A  S S+    +Y+ HP+ S    +   G          +++  P+H D+K   LPFY+++D L+KPTSL       +++T F F LTP Q Q I+SS   +  +  ++TVQ+QLRFCL+E SC QED +P    + +N K  +LPG  PP     EP++P RPINIT + RL+ T  N I V W  +++G+ ++  V+LVK +    L+Q+L+AK  R P H+ A IKEKL  DPDSEIA TSL+VSL CP+G+ R+T+PCRA  C HLQCFD +LYIQMNE+KP+WVCPVCD+KA Y+ L  DG+FM+I++    CDEI F EDG+W   RS  E++E S
Sbjct:    4 SAELKQMVMSLRVSELQVLLGYAGRNKHGRKHELLTKALHLLKAGCSPAVQMKIK--ELYRRRFPQKIMTPADLSI---------PNVHS---------------------SPMPATLSPSTIPQLTYDGHPASSPLLPVSLLGPKHELELPHLTSALHPVHPDIKLQKLPFYDLLDELIKPTSLASDNSQRFRETCFAFALTPQQVQQISSSMDISGTKC-DFTVQVQLRFCLSETSCPQEDHFPPNLCVKVNTKPCSLPGYLPPTKNGVEPKRPSRPINITSLVRLSTTVPNTIVVSWT-AEIGRNYSMAVYLVKQLSSTVLLQRLRAKGIRNPDHSRALIKEKLTADPDSEIATTSLRVSLLCPLGKMRLTIPCRALTCSHLQCFDATLYIQMNEKKPTWVCPVCDKKAPYEHLIIDGLFMEILKYCTDCDEIQFKEDGTWAPMRSKKEVQEVS 426
The following BLAST results are available for this feature:
BLAST of TCONS_00056919-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PIAS15.615e-11743.11E3 SUMO-protein ligase PIAS1 OS=Homo sapiens GN=PI... [more]
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