TCONS_00056924-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056924-protein
Unique NameTCONS_00056924-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length397

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056924-protein ID=TCONS_00056924-protein|Name=TCONS_00056924-protein|organism=Clytia hemisphaerica|type=polypeptide|length=397bp
MVKKGLMERLNSDEVVIGDGGFVFALEKRGYVKAGPWTPEAVVESPEAVK
QLHREFLRAGSTVMQTFTFYASEDKLDNRGNECAAKYGVKEINDAACRLA
REVANEGDALVAGGISQTPAYLSGLGKEKVQAEFKKQVDSFVANKVDFLI
AEYFEHVEEIEWAIEALKKFSGGMAVCANMCIGEEGDMHGVSAGECAVRM
AKAGADVVGINCHFGPVEVMRGIRKMKEALDKEGIKVHLMTQPLGFHTPD
AKAQGFIDLPEFPFGLEPRICTRFDMHAYARDAYELGVRYIGGCCGFEPY
HIRALTQELQEERGVIPEGSKKHLPWGSSLELHTKPWVRARANRPYWENL
KPASGRPFSSSMSNPDQWGVTAGHKALKQHSEKTTKDETGGLKNYTS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035860XLOC_035860Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056924TCONS_00056924Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003726HCY_dom
IPR017226Betaine-hCys_S-MeTrfase_BHMT
Vocabulary: Molecular Function
TermDefinition
GO:0047150betaine-homocysteine S-methyltransferase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0009086methionine biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009086 methionine biosynthetic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0047150 betaine-homocysteine S-methyltransferase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003726Homocysteine-binding domainPFAMPF02574S-methyl_transcoord: 16..308
e-value: 2.8E-47
score: 161.7
IPR003726Homocysteine-binding domainGENE3D3.20.20.330coord: 1..366
e-value: 3.7E-89
score: 298.8
IPR003726Homocysteine-binding domainPROSITEPS50970HCYcoord: 4..309
score: 38.287
IPR003726Homocysteine-binding domainSUPERFAMILY82282Homocysteine S-methyltransferasecoord: 5..365
IPR017226Betaine-homocysteine S-methyltransferase, BHMTPIRSFPIRSF037505BHMTcoord: 1..367
e-value: 1.8E-163
score: 542.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 354..397

Blast
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BLAST of TCONS_00056924-protein vs. Swiss-Prot (Human)
Match: BHMT1 (Betaine--homocysteine S-methyltransferase 1 OS=Homo sapiens GN=BHMT PE=1 SV=2)

HSP 1 Score: 545.043 bits (1403), Expect = 0.000e+0
Identity = 252/386 (65.28%), Postives = 304/386 (78.76%), Query Frame = 0 
Query:    3 KKGLMERLNSDEVVIGDGGFVFALEKRGYVKAGPWTPEAVVESPEAVKQLHREFLRAGSTVMQTFTFYASEDKLDNRGNECAAKYGVKEINDAACRLAREVANEGDALVAGGISQTPAYLSGLGKEKVQAEFKKQVDSFVANKVDFLIAEYFEHVEEIEWAIEALKKFSGGMAVCANMCIGEEGDMHGVSAGECAVRMAKAGADVVGINCHFGPVEVMRGIRKMKEALDKEGIKVHLMTQPLGFHTPDAKAQGFIDLPEFPFGLEPRICTRFDMHAYARDAYELGVRYIGGCCGFEPYHIRALTQELQEERGVIPEGSKKHLPWGSSLELHTKPWVRARANRPYWENLKPASGRPFSSSMSNPDQWGVTAGHKALKQHSEKTTKDE 388
            KKG++ERLN+ E+VIGDGGFVFALEKRGYVKAGPWTPEA VE PEAV+QLHREFLRAGS VMQTFTFYASEDKL+NRGN    K   +E+N+AAC +AR+VA+EGDALVAGG+SQTP+YLS   + +V+  F +Q++ F+   VDFLIAEYFEHVEE  WA+E L   + G  V A MCIG EGD+HGV  GECAVR+ KAGA ++G+NCHF P   ++ ++ MKE L+   +K HLM+QPL +HTPD   QGFIDLPEFPFGLEPR+ TR+D+  YAR+AY LGVRYIGGCCGFEPYHIRA+ +EL  ERG +P  S+KH  WGS L++HTKPWVRARA + YWENL+ ASGRP++ SMS PD WGVT G   L Q  E TT+ +
Sbjct:   10 KKGILERLNAGEIVIGDGGFVFALEKRGYVKAGPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRGNYVLEKISGQEVNEAACDIARQVADEGDALVAGGVSQTPSYLSCKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETL--IASGKPVAATMCIGPEGDLHGVPPGECAVRLVKAGASIIGVNCHFDPTISLKTVKLMKEGLEAARLKAHLMSQPLAYHTPDCNKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYIGGCCGFEPYHIRAIAEELAPERGFLPPASEKHGSWGSGLDMHTKPWVRARARKEYWENLRIASGRPYNPSMSKPDGWGVTKGTAELMQQKEATTEQQ 393
The following BLAST results are available for this feature:
BLAST of TCONS_00056924-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BHMT10.000e+065.28Betaine--homocysteine S-methyltransferase 1 OS=Hom... [more]
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