TCONS_00057033-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057033-protein
Unique NameTCONS_00057033-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length262

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057033-protein ID=TCONS_00057033-protein|Name=TCONS_00057033-protein|organism=Clytia hemisphaerica|type=polypeptide|length=262bp
MEVGKLLINEALPIQQSHHQQKPPVSNPVITFSLEIRIQEFLAGLCNLSL
QNLFNPLFMGDQLGNLFSFVPVNTVYSSSAVNRFPQTSHHQITFSVEIKT
RGVLVGTCNISFANIYKPMEIHDGRGNMFLFFPNKEIYKKTFLSIDDIAK
YLRYQVPYGSFGTGYDFKGNNQPLATIDEHYLRESYLECKECGKWFSLQN
RFDKHMATDHVGVMTYHCQNCGKGFTTSIGLKNHNKPRQRKSMFRCEVCS
KKFKRKCTLTRH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035928XLOC_035928Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057033TCONS_00057033Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 216..236
e-value: 23.0
score: 10.1
coord: 187..210
e-value: 0.028
score: 23.6
coord: 244..262
e-value: 190.0
score: 2.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 189..210
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 187..215
score: 10.263
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 244..262
score: 10.221
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 216..243
score: 9.515
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 184..234
NoneNo IPR availableGENE3D3.30.160.60coord: 248..262
e-value: 0.0018
score: 17.9
NoneNo IPR availableGENE3D3.30.160.60coord: 195..205
e-value: 0.017
score: 14.7
NoneNo IPR availableGENE3D2.20.28.30coord: 227..247
e-value: 1.9E-9
score: 37.0
NoneNo IPR availableGENE3D3.30.160.60coord: 206..226
e-value: 5.7E-7
score: 28.9
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 188..210
e-value: 0.0012
score: 19.4
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 216..234
e-value: 0.02
score: 15.2
NoneNo IPR availableGENE3D3.30.160.60coord: 14..194
e-value: 0.0072
score: 15.8

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057033-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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